SCOPe 2.06: Protein: Medium chain acyl-CoA dehydrogenase, NM domains

Lineage for Protein: Medium chain acyl-CoA dehydrogenase, NM domains

Root: SCOPe 2.06
Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)
Fold e.6: Acyl-CoA dehydrogenase NM domain-like [56644] (1 superfamily)
2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology
Superfamily e.6.1: Acyl-CoA dehydrogenase NM domain-like [56645] (3 families)
flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles)
Family e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains [56646] (10 proteins)
Protein Medium chain acyl-CoA dehydrogenase, NM domains [56649] (3 species)

Species:

Human (Homo sapiens) [TaxId:9606] [56651] (5 PDB entries)
Uniprot P11310 34-421
1. Domains for 1egc:
  1. Domain d1egca2: 1egc A:10-241 [42861]
    Other proteins in same PDB: d1egca1, d1egcb1, d1egcc1, d1egcd1
    complexed with co8, fad; mutant
  2. Domain d1egcb2: 1egc B:10-241 [42862]
    Other proteins in same PDB: d1egca1, d1egcb1, d1egcc1, d1egcd1
    complexed with co8, fad; mutant
  3. Domain d1egcc2: 1egc C:10-241 [42863]
    Other proteins in same PDB: d1egca1, d1egcb1, d1egcc1, d1egcd1
    complexed with co8, fad; mutant
  4. Domain d1egcd2: 1egc D:10-241 [42864]
    Other proteins in same PDB: d1egca1, d1egcb1, d1egcc1, d1egcd1
    complexed with co8, fad; mutant
2. Domains for 1egd:
  1. Domain d1egda2: 1egd A:10-241 [42857]
    Other proteins in same PDB: d1egda1, d1egdb1, d1egdc1, d1egdd1
    complexed with fad; mutant
  2. Domain d1egdb2: 1egd B:10-241 [42858]
    Other proteins in same PDB: d1egda1, d1egdb1, d1egdc1, d1egdd1
    complexed with fad; mutant
  3. Domain d1egdc2: 1egd C:10-241 [42859]
    Other proteins in same PDB: d1egda1, d1egdb1, d1egdc1, d1egdd1
    complexed with fad; mutant
  4. Domain d1egdd2: 1egd D:10-241 [42860]
    Other proteins in same PDB: d1egda1, d1egdb1, d1egdc1, d1egdd1
    complexed with fad; mutant
3. Domains for 1ege:
  1. Domain d1egea2: 1ege A:10-241 [42865]
    Other proteins in same PDB: d1egea1, d1egeb1, d1egec1, d1eged1
    complexed with fad; mutant
  2. Domain d1egeb2: 1ege B:10-241 [42866]
    Other proteins in same PDB: d1egea1, d1egeb1, d1egec1, d1eged1
    complexed with fad; mutant
  3. Domain d1egec2: 1ege C:10-241 [42867]
    Other proteins in same PDB: d1egea1, d1egeb1, d1egec1, d1eged1
    complexed with fad; mutant
  4. Domain d1eged2: 1ege D:10-241 [42868]
    Other proteins in same PDB: d1egea1, d1egeb1, d1egec1, d1eged1
    complexed with fad; mutant
4. Domains for 1t9g:
  1. Domain d1t9ga2: 1t9g A:10-241 [106712]
    Other proteins in same PDB: d1t9ga1, d1t9gb1, d1t9gc1, d1t9gd1, d1t9gr_, d1t9gs_
    complexed with amp, fad
  2. Domain d1t9gb2: 1t9g B:10-241 [106714]
    Other proteins in same PDB: d1t9ga1, d1t9gb1, d1t9gc1, d1t9gd1, d1t9gr_, d1t9gs_
    complexed with amp, fad
  3. Domain d1t9gc2: 1t9g C:10-241 [106716]
    Other proteins in same PDB: d1t9ga1, d1t9gb1, d1t9gc1, d1t9gd1, d1t9gr_, d1t9gs_
    complexed with amp, fad
  4. Domain d1t9gd2: 1t9g D:10-241 [106718]
    Other proteins in same PDB: d1t9ga1, d1t9gb1, d1t9gc1, d1t9gd1, d1t9gr_, d1t9gs_
    complexed with amp, fad
5. Domains for 4p13:
  1. Domain d4p13a1: 4p13 A:10-241 [270325]
    Other proteins in same PDB: d4p13a2, d4p13b2, d4p13c2, d4p13d2
    automated match to d1egda2
    complexed with fad; mutant
  2. Domain d4p13b1: 4p13 B:10-241 [270323]
    Other proteins in same PDB: d4p13a2, d4p13b2, d4p13c2, d4p13d2
    automated match to d1egda2
    complexed with fad; mutant
  3. Domain d4p13c1: 4p13 C:10-241 [270321]
    Other proteins in same PDB: d4p13a2, d4p13b2, d4p13c2, d4p13d2
    automated match to d1egda2
    complexed with fad; mutant
  4. Domain d4p13d1: 4p13 D:10-241 [270319]
    Other proteins in same PDB: d4p13a2, d4p13b2, d4p13c2, d4p13d2
    automated match to d1egda2
    complexed with fad; mutant
Pig (Sus scrofa) [TaxId:9823] [56650] (3 PDB entries)
1. Domains for 1udy:
  1. Domain d1udya2: 1udy A:11-241 [99232]
    Other proteins in same PDB: d1udya1, d1udyb1, d1udyc1, d1udyd1
    complexed with cs8, fad
  2. Domain d1udyb2: 1udy B:11-241 [99234]
    Other proteins in same PDB: d1udya1, d1udyb1, d1udyc1, d1udyd1
    complexed with cs8, fad
  3. Domain d1udyc2: 1udy C:11-241 [99236]
    Other proteins in same PDB: d1udya1, d1udyb1, d1udyc1, d1udyd1
    complexed with cs8, fad
  4. Domain d1udyd2: 1udy D:11-241 [99238]
    Other proteins in same PDB: d1udya1, d1udyb1, d1udyc1, d1udyd1
    complexed with cs8, fad
2. Domains for 3mdd:
  1. Domain d3mdda2: 3mdd A:11-241 [42853]
    Other proteins in same PDB: d3mdda1, d3mddb1
    complexed with fad
  2. Domain d3mddb2: 3mdd B:11-241 [42854]
    Other proteins in same PDB: d3mdda1, d3mddb1
    complexed with fad
3. Domains for 3mde:
  1. Domain d3mdea2: 3mde A:11-241 [42855]
    Other proteins in same PDB: d3mdea1, d3mdeb1
    complexed with co8, fad
  2. Domain d3mdeb2: 3mde B:11-241 [42856]
    Other proteins in same PDB: d3mdea1, d3mdeb1
    complexed with co8, fad
Thermus thermophilus [TaxId:274] [118186] (1 PDB entry)
Uniprot Q5SJ70 32-409
- Domains for 1ukw:
  1. Domain d1ukwa2: 1ukw A:32-258 [113264]
    Other proteins in same PDB: d1ukwa1, d1ukwb1
    complexed with co, fad
  2. Domain d1ukwb2: 1ukw B:32-258 [113266]
    Other proteins in same PDB: d1ukwa1, d1ukwb1
    complexed with co, fad

More info for Protein Medium chain acyl-CoA dehydrogenase, NM domains from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains

Timeline for Protein Medium chain acyl-CoA dehydrogenase, NM domains from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains:

Protein Medium chain acyl-CoA dehydrogenase, NM domains from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains first appeared (with stable ids) in SCOP 1.55, called Protein Medium chain acyl-CoA dehydrogenase from e.6.1.1: Acyl-CoA dehydrogenase (flavoprotein), N-terminal and middle domains
Protein Medium chain acyl-CoA dehydrogenase, NM domains from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains appears in SCOPe 2.05
Protein Medium chain acyl-CoA dehydrogenase, NM domains from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains appears in SCOPe 2.07
Protein Medium chain acyl-CoA dehydrogenase, NM domains from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains appears in the current release, SCOPe 2.08