Lineage for Protein: Class D beta-lactamase

  1. Root: SCOPe 2.05
  2. 1949014Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)
  3. 1949285Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
    contains a cluster of helices and an alpha+beta sandwich
  4. 1949286Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families) (S)
  5. 1949287Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (19 proteins)
  6. 1949750Protein Class D beta-lactamase [56622] (4 species)

Species:

  1. 1949751Escherichia coli, OXA-1 [TaxId:562] [82837] (3 PDB entries)
    1. Domains for 1m6k:
      1. 1949754Domain d1m6ka_: 1m6k A: [78695]
        complexed with mpd
      2. 1949755Domain d1m6kb_: 1m6k B: [78696]
        complexed with mpd
    2. Domains for 3isg:
      1. 1949752Domain d3isga_: 3isg A: [178589]
        automated match to d1m6ka_
        complexed with drw, mpd
      2. 1949753Domain d3isgb_: 3isg B: [178590]
        automated match to d1m6ka_
        complexed with drw, mpd
    3. Domains for 4mll:
      1. 1949756Domain d4mlla_: 4mll A: [228263]
        automated match to d4f7yd_
        complexed with 1s6, mpd, po4
      2. 1949757Domain d4mllb_: 4mll B: [228264]
        automated match to d4f7yb_
        complexed with 1s6, mpd, po4
      3. 1949758Domain d4mllc_: 4mll C: [228265]
        automated match to d4f7yb_
        complexed with 1s6, mpd, po4
      4. 1949759Domain d4mlld_: 4mll D: [228262]
        automated match to d4f7yd_
        complexed with 1s6, mpd, po4
  2. 1949760Pseudomonas aeruginosa, OXA-10 [TaxId:287] [56623] (27 PDB entries)
    1. Domains for 1e3u:
      1. 1949769Domain d1e3ua_: 1e3u A: [42755]
        complexed with auc, edo, so4
      2. 1949770Domain d1e3ub_: 1e3u B: [42756]
        complexed with auc, edo, so4
      3. 1949771Domain d1e3uc_: 1e3u C: [42757]
        complexed with auc, edo, so4
      4. 1949772Domain d1e3ud_: 1e3u D: [42758]
        complexed with auc, edo, so4
    2. Domains for 1e4d:
      1. 1949781Domain d1e4da_: 1e4d A: [42759]
        complexed with edo, so4
      2. 1949782Domain d1e4db_: 1e4d B: [42760]
        complexed with edo, so4
      3. 1949783Domain d1e4dc_: 1e4d C: [42761]
        complexed with edo, so4
      4. 1949784Domain d1e4dd_: 1e4d D: [42762]
        complexed with edo, so4
    3. Domains for 1ewz:
      1. 1949823Domain d1ewza_: 1ewz A: [42765]
      2. 1949824Domain d1ewzb_: 1ewz B: [42766]
      3. 1949825Domain d1ewzc_: 1ewz C: [42767]
      4. 1949826Domain d1ewzd_: 1ewz D: [42768]
    4. Domains for 1fof:
      1. 1949797Domain d1fofa_: 1fof A: [42763]
        complexed with co, so4
      2. 1949798Domain d1fofb_: 1fof B: [42764]
        complexed with co, so4
    5. Domains for 1k4e:
      1. 1949811Domain d1k4ea_: 1k4e A: [68136]
        complexed with so4
      2. 1949812Domain d1k4eb_: 1k4e B: [68137]
        complexed with so4
    6. Domains for 1k4f:
      1. 1949767Domain d1k4fa_: 1k4f A: [68138]
        complexed with so4
      2. 1949768Domain d1k4fb_: 1k4f B: [68139]
        complexed with so4
    7. Domains for 1k54:
      1. 1949773Domain d1k54a_: 1k54 A: [68152]
        complexed with edo, hoq, so4
      2. 1949774Domain d1k54b_: 1k54 B: [68153]
        complexed with edo, hoq, so4
      3. 1949775Domain d1k54c_: 1k54 C: [68154]
        complexed with edo, hoq, so4
      4. 1949776Domain d1k54d_: 1k54 D: [68155]
        complexed with edo, hoq, so4
    8. Domains for 1k55:
      1. 1949763Domain d1k55a_: 1k55 A: [68156]
        complexed with edo, so4
      2. 1949764Domain d1k55b_: 1k55 B: [68157]
        complexed with edo, so4
      3. 1949765Domain d1k55c_: 1k55 C: [68158]
        complexed with edo, so4
      4. 1949766Domain d1k55d_: 1k55 D: [68159]
        complexed with edo, so4
    9. Domains for 1k56:
      1. 1949791Domain d1k56a_: 1k56 A: [68160]
        complexed with so4
      2. 1949792Domain d1k56b_: 1k56 B: [68161]
        complexed with so4
      3. 1949793Domain d1k56c_: 1k56 C: [68162]
        complexed with so4
      4. 1949794Domain d1k56d_: 1k56 D: [68163]
        complexed with so4
    10. Domains for 1k57:
      1. 1949787Domain d1k57a_: 1k57 A: [68164]
        complexed with so4
      2. 1949788Domain d1k57b_: 1k57 B: [68165]
        complexed with so4
      3. 1949789Domain d1k57c_: 1k57 C: [68166]
        complexed with so4
      4. 1949790Domain d1k57d_: 1k57 D: [68167]
        complexed with so4
    11. Domains for 1k6r:
      1. 1949821Domain d1k6ra_: 1k6r A: [84305]
        complexed with mx1
      2. 1949822Domain d1k6rb_: 1k6r B: [84306]
        complexed with mx1
    12. Domains for 1k6s:
      1. 1949809Domain d1k6sa_: 1k6s A: [84307]
        complexed with ca, iap, so4
      2. 1949810Domain d1k6sb_: 1k6s B: [84308]
        complexed with ca, iap, so4
    13. Domains for 2hp5:
      1. 1949831Domain d2hp5a_: 2hp5 A: [165193]
        automated match to d1k4fb_
        complexed with co, so4; mutant
      2. 1949832Domain d2hp5b_: 2hp5 B: [165194]
        automated match to d1k4fb_
        complexed with co, so4; mutant
      3. 1949833Domain d2hp5c_: 2hp5 C: [165195]
        automated match to d1k4fb_
        complexed with co, so4; mutant
      4. 1949834Domain d2hp5d_: 2hp5 D: [165196]
        automated match to d1k4fb_
        complexed with co, so4; mutant
    14. Domains for 2hp6:
      1. 1949813Domain d2hp6a_: 2hp6 A: [165197]
        automated match to d1k4fb_
        complexed with so4; mutant
      2. 1949814Domain d2hp6b_: 2hp6 B: [165198]
        automated match to d1k4fb_
        complexed with so4; mutant
    15. Domains for 2hp9:
      1. 1949827Domain d2hp9a_: 2hp9 A: [165199]
        automated match to d1k4fb_
        complexed with so4; mutant
      2. 1949828Domain d2hp9b_: 2hp9 B: [165200]
        automated match to d1k4fb_
        complexed with so4; mutant
    16. Domains for 2hpb:
      1. 1949819Domain d2hpba_: 2hpb A: [165201]
        automated match to d1k4fb_
        complexed with so4; mutant
      2. 1949820Domain d2hpbb_: 2hpb B: [165202]
        automated match to d1k4fb_
        complexed with so4; mutant
    17. Domains for 2rl3:
      1. 1949785Domain d2rl3a_: 2rl3 A: [168173]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
      2. 1949786Domain d2rl3b_: 2rl3 B: [168174]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
    18. Domains for 2wgi:
      1. 1949829Domain d2wgia_: 2wgi A: [169326]
        automated match to d1k4fb_
        complexed with gol, pnm
      2. 1949830Domain d2wgib_: 2wgi B: [169327]
        automated match to d1k4fb_
        complexed with gol, pnm
    19. Domains for 2wgv:
      1. 1949779Domain d2wgva_: 2wgv A: [169335]
        automated match to d1k4fb_
        complexed with cit, cl, gol, so4; mutant
      2. 1949780Domain d2wgvb_: 2wgv B: [169336]
        automated match to d1k4fb_
        complexed with cit, cl, gol, so4; mutant
    20. Domains for 2wgw:
      1. 1949777Domain d2wgwa_: 2wgw A: [169337]
        automated match to d1k4fb_
        complexed with gol, so4; mutant
      2. 1949778Domain d2wgwb_: 2wgw B: [169338]
        automated match to d1k4fb_
        complexed with gol, so4; mutant
    21. Domains for 2wkh:
      1. 1949817Domain d2wkha_: 2wkh A: [169403]
        automated match to d1k4fb_
        complexed with so4, zz7
      2. 1949818Domain d2wkhb_: 2wkh B: [169404]
        automated match to d1k4fb_
        complexed with so4, zz7
    22. Domains for 2wki:
      1. 1949803Domain d2wkia_: 2wki A: [169405]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
      2. 1949804Domain d2wkib_: 2wki B: [169406]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
    23. Domains for 2x01:
      1. 1949815Domain d2x01a_: 2x01 A: [169739]
        automated match to d1k4fb_
        complexed with dms, pg4, so4; mutant
      2. 1949816Domain d2x01b_: 2x01 B: [169740]
        automated match to d1k4fb_
        complexed with dms, pg4, so4; mutant
    24. Domains for 2x02:
      1. 1949761Domain d2x02a_: 2x02 A: [169741]
        automated match to d1k4fb_
        complexed with dms, gol, pg4, so4
      2. 1949762Domain d2x02b_: 2x02 B: [169742]
        automated match to d1k4fb_
        complexed with dms, gol, pg4, so4
    25. Domains for 3lce:
      1. 1949799Domain d3lcea_: 3lce A: [180180]
        automated match to d1e4dc_
        complexed with gol, lce, po4
      2. 1949800Domain d3lceb_: 3lce B: [180181]
        automated match to d1e4dc_
        complexed with gol, lce, po4
      3. 1949801Domain d3lcec_: 3lce C: [180182]
        automated match to d1e4dc_
        complexed with gol, lce, po4
      4. 1949802Domain d3lced_: 3lce D: [180183]
        automated match to d1e4dc_
        complexed with gol, lce, po4
    26. Domains for 4s2o:
      1. 1949795Domain d4s2oa_: 4s2o A: [269392]
        automated match to d1fofa_
        complexed with co, nxl
      2. 1949796Domain d4s2ob_: 4s2o B: [269391]
        automated match to d1fofa_
        complexed with co, nxl
    27. Domains for 4wz5:
      1. 1949805Domain d4wz5a_: 4wz5 A: [275707]
        automated match to d1k4fa_
        complexed with 3vu, co2, so4
      2. 1949806Domain d4wz5b_: 4wz5 B: [275706]
        automated match to d1k4fa_
        complexed with 3vu, co2, so4
      3. 1949807Domain d4wz5c_: 4wz5 C: [275711]
        automated match to d1k4fb_
        complexed with 3vu, co2, so4
      4. 1949808Domain d4wz5d_: 4wz5 D: [275712]
        automated match to d1k4fb_
        complexed with 3vu, co2, so4
  3. 1949835Pseudomonas aeruginosa, OXA-13 [TaxId:287] [64474] (3 PDB entries)
    1. Domains for 1h5x:
      1. 1949838Domain d1h5xa_: 1h5x A: [70899]
        complexed with im2, so4
      2. 1949839Domain d1h5xb_: 1h5x B: [70900]
        complexed with im2, so4
    2. Domains for 1h8y:
      1. 1949840Domain d1h8ya_: 1h8y A: [60801]
        complexed with mer, so4
      2. 1949841Domain d1h8yb_: 1h8y B: [60802]
        complexed with mer, so4
    3. Domains for 1h8z:
      1. 1949836Domain d1h8za_: 1h8z A: [60803]
        complexed with so4
      2. 1949837Domain d1h8zb_: 1h8z B: [60804]
        complexed with so4
  4. 1949842Salmonella typhimurium, OXA-2 [TaxId:90371] [90083] (1 PDB entry)

More info for Protein Class D beta-lactamase from e.3.1.1: beta-Lactamase/D-ala carboxypeptidase

Timeline for Protein Class D beta-lactamase from e.3.1.1: beta-Lactamase/D-ala carboxypeptidase: