SCOP 1.71: Family d.169.1.1: C-type lectin domain

Lineage for Family d.169.1.1: C-type lectin domain

1. Root: SCOP 1.71

2. Class d: Alpha and beta proteins (a+b) [53931] (286 folds)

3. Fold d.169: C-type lectin-like [56435] (1 superfamily)
   unusual fold

4. Superfamily d.169.1: C-type lectin-like [56436] (6 families)

5. Family d.169.1.1: C-type lectin domain [56437] (26 proteins)
   Pfam 00059

Proteins:

1. Aggrecan core protein [111260] (1 species)

   • Species Rat (Rattus norvegicus) [TaxId:10116] [111261] (1 PDB entry)

2. CD69 [56442] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [56443] (3 PDB entries)

3. CD94 [56440] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [56441] (1 PDB entry)

4. DC-SIGN (dendritic cell-specific ICAM-3 grabbing nonintegrin) [69855] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [69856] (3 PDB entries)

5. DC-SIGNR (DC-SIGN related receptor) [69857] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [69858] (3 PDB entries)

6. E-selectin, C-lectin domain [56456] (1 species)
   folowed by EGF-like module

   • Species Human (Homo sapiens) [TaxId:9606] [56457] (2 PDB entries)

7. EBV gp42 [75583] (1 species)

   • Species Epstein-Barr virus [TaxId:10376] [75584] (1 PDB entry)

8. Eosinophil major basic protein [64457] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [64458] (1 PDB entry)

9. Galactose-specific C-type lectin [90061] (1 species)

   • Species Western diamondback rattlesnake (Crotalus atrox) [TaxId:8730] [90062] (2 PDB entries)

10. H1 subunit of the asialoglycoprotein receptor [56454] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [56455] (1 PDB entry)

11. Hypothetical protein F28B4.3 [118166] (1 species)

    • Species Caenorhabditis elegans [118167] (1 PDB entry)

12. Lectin CEL-I [111262] (1 species)

    • Species Cucumaria echinata [TaxId:40245] [111263] (2 PDB entries)

13. Lectin TC14 [56463] (1 species)

    • Species Tunicate (Polyandrocarpa misakiensis) [TaxId:7723] [56464] (2 PDB entries)

14. Lithostathine, inhibitor of stone formation [56438] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [56439] (2 PDB entries)

15. Macrophage mannose receptor, CRD4 [56444] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [56445] (2 PDB entries)

16. Mannose-binding protein A, C-lectin domain [56458] (2 species)

    1. Species Human (Homo sapiens) [TaxId:9606] [56459] (1 PDB entry)

    2. Species Rat (Rattus norvegicus) [TaxId:10116] [56460] (38 PDB entries)

17. NK cell receptor [56452] (3 species)

    1. Species Mouse (Mus musculus), ly49-a [TaxId:10090] [56453] (1 PDB entry)

    2. Species Mouse (Mus musculus), ly49-c [TaxId:10090] [103351] (2 PDB entries)

    3. Species Mouse (Mus musculus), ly49-i [TaxId:10090] [75582] (1 PDB entry)

18. NK cell-activating receptor nkg2d [64453] (2 species)

    1. Species Human (Homo sapiens) [TaxId:9606] [64455] (3 PDB entries)

    2. Species Mouse (Mus musculus) [TaxId:10090] [64454] (2 PDB entries)

19. Ovocleidin-17 [90059] (1 species)
    major protein of the eggshell calcified layer

    • Species Chicken (Gallus gallus) [TaxId:9031] [90060] (1 PDB entry)

20. P-selectin, C-lectin domain [116731] (1 species)
    followed by EGF-like module

    • Species Human (Homo sapiens) [TaxId:9606] [116732] (3 PDB entries)

21. Pancreatitis-associated protein 1 [103341] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [103342] (1 PDB entry)

22. Snake coagglutinin alpha chain [88861] (9 species)
    heterodimeric coagulation factors IX/X-binding protein (IX/X-BP)

    1. Species Habu snake (Trimeresurus flavoviridis) [TaxId:88087] [88862] (4 PDB entries)

    2. Species Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId:88087] [88863] (1 PDB entry)

    3. Species Jararaca (Bothrops jararaca), botrocetin [TaxId:8724] [88864] (2 PDB entries)

    4. Species Puff adder (Bitis arientans), bitiscetin [88866] (2 PDB entries)

    5. Species Saw-scaled viper (Echis carinatus), echicetin [TaxId:40353] [103346] (1 PDB entry)

    6. Species Sharp-nosed viper (Deinagkistrodon acutus) [TaxId:36307] [88865] (1 PDB entry)

    7. Species Snake (Echis multisquamatus), Ems16 [TaxId:93050] [103343] (2 PDB entries)

    8. Species South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId:8732] [103344] (1 PDB entry)

    9. Species Taiwan habu (Trimeresurus mucrosquamatus), mucrocetin [TaxId:103944] [103345] (1 PDB entry)

23. Snake coagglutinin beta chain [88867] (9 species)
    heterodimeric coagulation factors IX/X-binding protein (IX/X-BP)

    1. Species Habu snake (Trimeresurus flavoviridis) [TaxId:88087] [88868] (4 PDB entries)

    2. Species Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId:88087] [88869] (1 PDB entry)

    3. Species Jararaca (Bothrops jararaca), botrocetin [TaxId:8724] [88870] (2 PDB entries)

    4. Species Puff adder (Bitis arientans), bitiscetin [88872] (2 PDB entries)

    5. Species Saw-scaled viper (Echis carinatus), echicetin [TaxId:40353] [103350] (1 PDB entry)

    6. Species Sharp-nosed viper (Deinagkistrodon acutus) [TaxId:36307] [88871] (1 PDB entry)

    7. Species Snake (Echis multisquamatus), Ems16 [TaxId:93050] [103347] (2 PDB entries)

    8. Species South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId:8732] [103348] (1 PDB entry)

    9. Species Taiwan habu (Trimeresurus mucrosquamatus), mucrocetin [TaxId:103944] [103349] (1 PDB entry)

24. Surfactant protein, lectin domain [56461] (2 species)

    1. Species Human (Homo sapiens), SP-D [TaxId:9606] [56462] (3 PDB entries)

    2. Species Rat (Rattus norvegicus), SP-A [TaxId:10116] [103352] (2 PDB entries)

25. Tetranectin [56465] (1 species)
    trimeric plasminogen binding protein with an alpha-helical coiled coil

    • Species Human (Homo sapiens) [TaxId:9606] [56466] (3 PDB entries)

26. Type II antifreeze protein [56450] (1 species)

    • Species Sea raven (Hemitripterus americanus) [TaxId:8094] [56451] (1 PDB entry)

More info for Family d.169.1.1: C-type lectin domain

Timeline for Family d.169.1.1: C-type lectin domain:

• Family d.169.1.1: C-type lectin domain first appeared (with stable ids) in SCOP 1.55
  
• Family d.169.1.1: C-type lectin domain appears in SCOP 1.69
  
• Family d.169.1.1: C-type lectin domain appears in SCOP 1.73
  
• Family d.169.1.1: C-type lectin domain appears in the current release, SCOPe 2.08