Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily) unusual fold, defines family |
Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families) |
Family d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain [56328] (5 proteins) N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain) automatically mapped to Pfam PF02866 |
Protein Malate dehydrogenase [56329] (12 species) |
Aquaspirillum arcticum [TaxId:87645] [56336] (3 PDB entries) |
Domain d1b8pa2: 1b8p A:159-329 [42114] Other proteins in same PDB: d1b8pa1 |
Domain d1b8ua2: 1b8u A:159-329 [42116] Other proteins in same PDB: d1b8ua1 complexed with nad, oaa |
Domain d1b8va2: 1b8v A:159-329 [42115] Other proteins in same PDB: d1b8va1 complexed with nad |
Chlorobium tepidum [TaxId:1097] [69841] (1 PDB entry) |
Domain d1gv0a2: 1gv0 A:143-305 [65595] Other proteins in same PDB: d1gv0a1, d1gv0b1 complexed with nad |
Domain d1gv0b2: 1gv0 B:143-305 [65597] Other proteins in same PDB: d1gv0a1, d1gv0b1 complexed with nad |
Chlorobium vibrioforme [TaxId:1098] [69842] (2 PDB entries) |
Domain d1guza2: 1guz A:143-305 [65587] Other proteins in same PDB: d1guza1, d1guzb1, d1guzc1, d1guzd1 complexed with nad |
Domain d1guzb2: 1guz B:143-305 [65589] Other proteins in same PDB: d1guza1, d1guzb1, d1guzc1, d1guzd1 complexed with nad |
Domain d1guzc2: 1guz C:143-305 [65591] Other proteins in same PDB: d1guza1, d1guzb1, d1guzc1, d1guzd1 complexed with nad |
Domain d1guzd2: 1guz D:143-305 [65593] Other proteins in same PDB: d1guza1, d1guzb1, d1guzc1, d1guzd1 complexed with nad |
Domain d1gv1a2: 1gv1 A:143-305 [65599] Other proteins in same PDB: d1gv1a1, d1gv1b1, d1gv1c1, d1gv1d1 |
Domain d1gv1b2: 1gv1 B:143-299 [65601] Other proteins in same PDB: d1gv1a1, d1gv1b1, d1gv1c1, d1gv1d1 |
Domain d1gv1c2: 1gv1 C:143-305 [65603] Other proteins in same PDB: d1gv1a1, d1gv1b1, d1gv1c1, d1gv1d1 |
Domain d1gv1d2: 1gv1 D:143-302 [65605] Other proteins in same PDB: d1gv1a1, d1gv1b1, d1gv1c1, d1gv1d1 |
Chloroflexus aurantiacus [TaxId:1108] [69840] (7 PDB entries) Uniprot P80040 |
Domain d1guya2: 1guy A:144-306 [65583] Other proteins in same PDB: d1guya1, d1guyc1 complexed with cd, nad |
Domain d1guyc2: 1guy C:144-306 [65585] Other proteins in same PDB: d1guya1, d1guyc1 complexed with cd, nad |
Domain d1ur5a2: 1ur5 A:144-308 [99808] Other proteins in same PDB: d1ur5a1, d1ur5c1 complexed with cd, cl, na, nad |
Domain d1ur5c2: 1ur5 C:144-309 [99810] Other proteins in same PDB: d1ur5a1, d1ur5c1 complexed with cd, cl, na, nad |
Domain d1uxga2: 1uxg A:144-307 [108101] Other proteins in same PDB: d1uxga1, d1uxgb1 complexed with fum, nad; mutant |
Domain d1uxgb2: 1uxg B:144-307 [108103] Other proteins in same PDB: d1uxga1, d1uxgb1 complexed with fum, nad; mutant |
Domain d1uxha2: 1uxh A:144-307 [108105] Other proteins in same PDB: d1uxha1, d1uxhb1 complexed with fum, nad; mutant |
Domain d1uxhb2: 1uxh B:144-307 [108107] Other proteins in same PDB: d1uxha1, d1uxhb1 complexed with fum, nad; mutant |
Domain d1uxia2: 1uxi A:144-307 [108109] Other proteins in same PDB: d1uxia1, d1uxib1 complexed with fum, na, nad; mutant |
Domain d1uxib2: 1uxi B:144-307 [108111] Other proteins in same PDB: d1uxia1, d1uxib1 complexed with fum, na, nad; mutant |
Domain d1uxja2: 1uxj A:144-307 [108113] Other proteins in same PDB: d1uxja1, d1uxjc1 complexed with cd, cl, na, nad; mutant |
Domain d1uxjc2: 1uxj C:144-307 [108115] Other proteins in same PDB: d1uxja1, d1uxjc1 complexed with cd, cl, na, nad; mutant |
Domain d1uxka2: 1uxk A:144-307 [108117] Other proteins in same PDB: d1uxka1, d1uxkc1 complexed with cd, cl, na, nad; mutant |
Domain d1uxkc2: 1uxk C:144-307 [108119] Other proteins in same PDB: d1uxka1, d1uxkc1 complexed with cd, cl, na, nad; mutant |
Chloroflexus sp. [TaxId:480224] [236535] (1 PDB entry) |
Domain d4cl3a2: 4cl3 A:144-309 [236537] Other proteins in same PDB: d4cl3a1, d4cl3d1 automated match to d1guya2 complexed with act, cd, cl, peg |
Domain d4cl3d2: 4cl3 D:144-309 [236538] Other proteins in same PDB: d4cl3a1, d4cl3d1 automated match to d1guya2 complexed with act, cd, cl, peg |
Escherichia coli [TaxId:562] [56333] (4 PDB entries) |
Domain d1emda2: 1emd A:146-312 [42103] Other proteins in same PDB: d1emda1 complexed with cit, nad |
Domain d1ib6a2: 1ib6 A:146-312 [62147] Other proteins in same PDB: d1ib6a1, d1ib6b1, d1ib6c1, d1ib6d1 complexed with nad, so4 |
Domain d1ib6b2: 1ib6 B:146-312 [62149] Other proteins in same PDB: d1ib6a1, d1ib6b1, d1ib6c1, d1ib6d1 complexed with nad, so4 |
Domain d1ib6c2: 1ib6 C:146-312 [62151] Other proteins in same PDB: d1ib6a1, d1ib6b1, d1ib6c1, d1ib6d1 complexed with nad, so4 |
Domain d1ib6d2: 1ib6 D:146-312 [62153] Other proteins in same PDB: d1ib6a1, d1ib6b1, d1ib6c1, d1ib6d1 complexed with nad, so4 |
Domain d1ie3a2: 1ie3 A:146-312 [62305] Other proteins in same PDB: d1ie3a1, d1ie3b1, d1ie3c1, d1ie3d1 complexed with nad, pyr |
Domain d1ie3b2: 1ie3 B:146-312 [62307] Other proteins in same PDB: d1ie3a1, d1ie3b1, d1ie3c1, d1ie3d1 complexed with nad, pyr |
Domain d1ie3c2: 1ie3 C:146-312 [62309] Other proteins in same PDB: d1ie3a1, d1ie3b1, d1ie3c1, d1ie3d1 complexed with nad, pyr |
Domain d1ie3d2: 1ie3 D:146-312 [62311] Other proteins in same PDB: d1ie3a1, d1ie3b1, d1ie3c1, d1ie3d1 complexed with nad, pyr |
Domain d2cmda2: 2cmd A:146-312 [42102] Other proteins in same PDB: d2cmda1 complexed with cit |
Flaveria bidentis, chloroplast [TaxId:4224] [56332] (1 PDB entry) |
Domain d1civa2: 1civ A:194-385 [42101] Other proteins in same PDB: d1civa1 complexed with nap |
Haloarcula marismortui [TaxId:2238] [56335] (6 PDB entries) |
Domain d1d3aa2: 1d3a A:163-330 [42110] Other proteins in same PDB: d1d3aa1, d1d3ab1 complexed with cl, na |
Domain d1d3ab2: 1d3a B:163-330 [42111] Other proteins in same PDB: d1d3aa1, d1d3ab1 complexed with cl, na |
Domain d1gt2a4: 1gt2 A:163-330 [302444] Other proteins in same PDB: d1gt2a3, d1gt2b3 automated match to d1o6za2 complexed with cl, na, nad; mutant |
Domain d1gt2b4: 1gt2 B:163-330 [302446] Other proteins in same PDB: d1gt2a3, d1gt2b3 automated match to d1o6za2 complexed with cl, na, nad; mutant |
Domain d1hlpa2: 1hlp A:163-328 [42112] Other proteins in same PDB: d1hlpa1, d1hlpb1 complexed with nad |
Domain d1hlpb2: 1hlp B:163-328 [42113] Other proteins in same PDB: d1hlpa1, d1hlpb1 complexed with nad |
Domain d1o6za2: 1o6z A:163-330 [81108] Other proteins in same PDB: d1o6za1, d1o6zb1, d1o6zc1, d1o6zd1 complexed with cl, nad; mutant |
Domain d1o6zb2: 1o6z B:163-330 [81110] Other proteins in same PDB: d1o6za1, d1o6zb1, d1o6zc1, d1o6zd1 complexed with cl, nad; mutant |
Domain d1o6zc2: 1o6z C:163-330 [81112] Other proteins in same PDB: d1o6za1, d1o6zb1, d1o6zc1, d1o6zd1 complexed with cl, nad; mutant |
Domain d1o6zd2: 1o6z D:163-330 [81114] Other proteins in same PDB: d1o6za1, d1o6zb1, d1o6zc1, d1o6zd1 complexed with cl, nad; mutant |
Domain d2hlpa2: 2hlp A:163-330 [42108] Other proteins in same PDB: d2hlpa1, d2hlpb1 complexed with cl, na; mutant |
Domain d2hlpb2: 2hlp B:163-330 [42109] Other proteins in same PDB: d2hlpa1, d2hlpb1 complexed with cl, na; mutant |
Domain d2x0ra2: 2x0r A:163-330 [169771] Other proteins in same PDB: d2x0ra1, d2x0rb1 complexed with cl, na, nad; mutant |
Domain d2x0rb2: 2x0r B:163-330 [169773] Other proteins in same PDB: d2x0ra1, d2x0rb1 complexed with cl, na, nad; mutant |
Pig (Sus scrofa) [TaxId:9823] [56330] (3 PDB entries) |
Domain d1mlda2: 1mld A:145-313 [42089] Other proteins in same PDB: d1mlda1, d1mldb1, d1mldc1, d1mldd1 complexed with cit |
Domain d1mldb2: 1mld B:145-313 [42090] Other proteins in same PDB: d1mlda1, d1mldb1, d1mldc1, d1mldd1 complexed with cit |
Domain d1mldc2: 1mld C:145-313 [42091] Other proteins in same PDB: d1mlda1, d1mldb1, d1mldc1, d1mldd1 complexed with cit |
Domain d1mldd2: 1mld D:145-313 [42092] Other proteins in same PDB: d1mlda1, d1mldb1, d1mldc1, d1mldd1 complexed with cit |
Domain d4mdha2: 4mdh A:155-333 [42095] Other proteins in same PDB: d4mdha1, d4mdhb1 complexed with nad, so4 |
Domain d4mdhb2: 4mdh B:155-333 [42096] Other proteins in same PDB: d4mdha1, d4mdhb1 complexed with nad, so4 |
Domain d5mdha2: 5mdh A:155-333 [42093] Other proteins in same PDB: d5mdha1, d5mdhb1 complexed with mak, nad |
Domain d5mdhb2: 5mdh B:155-333 [42094] Other proteins in same PDB: d5mdha1, d5mdhb1 complexed with mak, nad |
Sorghum (Sorghum vulgare), chloroplast [TaxId:4558] [56331] (1 PDB entry) |
Domain d7mdha2: 7mdh A:198-385 [42097] Other proteins in same PDB: d7mdha1, d7mdhb1, d7mdhc1, d7mdhd1 complexed with zn |
Domain d7mdhb2: 7mdh B:198-386 [42098] Other proteins in same PDB: d7mdha1, d7mdhb1, d7mdhc1, d7mdhd1 complexed with zn |
Domain d7mdhc2: 7mdh C:198-384 [42099] Other proteins in same PDB: d7mdha1, d7mdhb1, d7mdhc1, d7mdhd1 complexed with zn |
Domain d7mdhd2: 7mdh D:198-381 [42100] Other proteins in same PDB: d7mdha1, d7mdhb1, d7mdhc1, d7mdhd1 complexed with zn |
Thermus flavus [TaxId:274] [56334] (2 PDB entries) |
Domain d1bdma2: 1bdm A:155-332 [42104] Other proteins in same PDB: d1bdma1, d1bdmb1 complexed with nax; mutant |
Domain d1bdmb2: 1bdm B:155-332 [42105] Other proteins in same PDB: d1bdma1, d1bdmb1 complexed with nax; mutant |
Domain d1bmda2: 1bmd A:155-332 [42106] Other proteins in same PDB: d1bmda1, d1bmdb1 complexed with nad |
Domain d1bmdb2: 1bmd B:155-332 [42107] Other proteins in same PDB: d1bmda1, d1bmdb1 complexed with nad |
Thermus thermophilus [TaxId:274] [82806] (7 PDB entries) identical sequence to that from the Thermus flavus enzyme |
Domain d1iz9a2: 1iz9 A:155-327 [76985] Other proteins in same PDB: d1iz9a1, d1iz9b1 |
Domain d1iz9b2: 1iz9 B:155-327 [76987] Other proteins in same PDB: d1iz9a1, d1iz9b1 |
Domain d1wzea2: 1wze A:154-332 [121496] Other proteins in same PDB: d1wzea1, d1wzeb1 automated match to d1y7ta2 complexed with nad |
Domain d1wzeb2: 1wze B:154-332 [121498] Other proteins in same PDB: d1wzea1, d1wzeb1 automated match to d1y7ta2 complexed with nad |
Domain d1wzia2: 1wzi A:154-332 [121504] Other proteins in same PDB: d1wzia1, d1wzib1 automated match to d1y7ta2 complexed with ndp |
Domain d1wzib2: 1wzi B:154-332 [121506] Other proteins in same PDB: d1wzia1, d1wzib1 automated match to d1y7ta2 complexed with ndp |
Domain d1y7ta2: 1y7t A:154-332 [122719] Other proteins in same PDB: d1y7ta1, d1y7tb1 automated match to d1iz9a2 complexed with ndp, trs |
Domain d1y7tb2: 1y7t B:154-332 [122721] Other proteins in same PDB: d1y7ta1, d1y7tb1 automated match to d1iz9a2 complexed with ndp, trs |
Domain d2cvqa2: 2cvq A:154-332 [130886] Other proteins in same PDB: d2cvqa1, d2cvqb1 automated match to d1iz9a2 complexed with ndp, trs |
Domain d2cvqb2: 2cvq B:154-332 [130888] Other proteins in same PDB: d2cvqa1, d2cvqb1 automated match to d1iz9a2 complexed with ndp, trs |
Timeline for Protein Malate dehydrogenase from d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain: