Lineage for Protein: Adenylation domain of NAD+-dependent DNA ligase

  1. Root: SCOP 1.67
  2. 405194Class d: Alpha and beta proteins (a+b) [53931] (260 folds)
  3. 418907Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 419108Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (4 families) (S)
    has a circularly permuted topology
  5. 419116Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (1 protein)
  6. 419117Protein Adenylation domain of NAD+-dependent DNA ligase [56097] (2 species)
    contains additional, N-terminal all-alpha subdomain

Species:

  1. 419118Bacillus stearothermophilus [TaxId:1422] [56098] (1 PDB entry)
  2. 419121Thermus filiformis [TaxId:276] [56099] (2 PDB entries)
    1. Domains for 1dgs:
      1. 419122Domain d1dgsa3: 1dgs A:1-314 [41581]
        Other proteins in same PDB: d1dgsa1, d1dgsa2, d1dgsb1, d1dgsb2
      2. 419123Domain d1dgsb3: 1dgs B:2001-2314 [41582]
        Other proteins in same PDB: d1dgsa1, d1dgsa2, d1dgsb1, d1dgsb2
        complexed with amp, zn
    2. Domains for 1v9p:
      1. 419124Domain d1v9pa3: 1v9p A:1-317 [100546]
        Other proteins in same PDB: d1v9pa1, d1v9pa2, d1v9pb1, d1v9pb2
      2. 419125Domain d1v9pb3: 1v9p B:2001-2317 [100549]
        Other proteins in same PDB: d1v9pa1, d1v9pa2, d1v9pb1, d1v9pb2
        complexed with amp, zn

More info for Protein Adenylation domain of NAD+-dependent DNA ligase from d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase

Timeline for Protein Adenylation domain of NAD+-dependent DNA ligase from d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase: