Lineage for Species: Chlorella virus PBCV-1 [TaxId: 10506]
- Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds) 
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamilies
Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families) 
has a circularly permuted topology
Family d.142.2.1: ATP-dependent DNA ligase catalytic domain [56092] (2 proteins)
automatically mapped to Pfam PF01068Protein ATP-dependent DNA ligase, N-terminal domain [56093] (2 species) Species Chlorella virus PBCV-1 [TaxId:10506] [56095] (4 PDB entries)
PDB entries in Species: Chlorella virus PBCV-1 [TaxId: 10506]:
- Domain(s) for 1fvi:
Domain d1fvia2: 1fvi A:2-189 [41578]
Other proteins in same PDB: d1fvia1
complexed with amp, so4
- Domain(s) for 1p8l:
Domain d1p8la2: 1p8l A:2-189 [94364]
Other proteins in same PDB: d1p8la1
complexed with amp
- Domain(s) for 2q2t:
Domain d2q2ta2: 2q2t A:1-189 [150015]
Other proteins in same PDB: d2q2ta1
automatically matched to d1p8la2
protein/DNA complex; complexed with amp
- Domain(s) for 2q2u:
Domain d2q2ua2: 2q2u A:1-189 [150017]
Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
automatically matched to d1p8la2
protein/DNA complex
Domain d2q2ub2: 2q2u B:1-189 [150019]
Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
automatically matched to d1p8la2
protein/DNA complex
Domain d2q2uc2: 2q2u C:1-189 [150021]
Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
automatically matched to d1p8la2
protein/DNA complex
Domain d2q2ud2: 2q2u D:1-189 [150023]
Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
automatically matched to d1p8la2
protein/DNA complex
More info for Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain
Timeline for Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain:
- Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Species Chlorella virus, PBCV-1 from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain
- Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain appears in SCOPe 2.07