Lineage for Species: Clostridium symbiosum [TaxId: 1512]
- Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds) 
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamiliesSuperfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) 
Family d.142.1.5: Pyruvate phosphate dikinase, N-terminal domain [56085] (2 proteins)
automatically mapped to Pfam PF01326Protein Pyruvate phosphate dikinase, N-terminal domain [56086] (3 species)
the common fold is interrupted by a 4-helical subdomain (residues 112-198)Species Clostridium symbiosum [TaxId:1512] [56087] (7 PDB entries)
PDB entries in Species: Clostridium symbiosum [TaxId: 1512]:
- Domain(s) for 1dik:
Domain d1dika3: 1dik A:2-376 [41572]
Other proteins in same PDB: d1dika1, d1dika2
CASP1
complexed with so4
- Domain(s) for 1ggo:
Domain d1ggoa3: 1ggo A:2-376 [41573]
Other proteins in same PDB: d1ggoa1, d1ggoa2
complexed with so4; mutant
- Domain(s) for 1jde:
Domain d1jdea3: 1jde A:2-376 [66548]
Other proteins in same PDB: d1jdea1, d1jdea2
complexed with so4; mutant
- Domain(s) for 1kbl:
Domain d1kbla3: 1kbl A:2-376 [68386]
Other proteins in same PDB: d1kbla1, d1kbla2
complexed with nh4, so4
- Domain(s) for 1kc7:
Domain d1kc7a3: 1kc7 A:2-376 [68425]
Other proteins in same PDB: d1kc7a1, d1kc7a2
complexed with mg, ppr, so4
- Domain(s) for 2dik:
Domain d2dika3: 2dik A:2-376 [41574]
Other proteins in same PDB: d2dika1, d2dika2
complexed with so4; mutant
- Domain(s) for 2r82:
Domain d2r82a3: 2r82 A:2-376 [151669]
Other proteins in same PDB: d2r82a1, d2r82a2
automatically matched to d1ggoa3
complexed with so4; mutant
More info for Species Clostridium symbiosum [TaxId:1512] from d.142.1.5 Pyruvate phosphate dikinase, N-terminal domain
Timeline for Species Clostridium symbiosum [TaxId:1512] from d.142.1.5 Pyruvate phosphate dikinase, N-terminal domain:
- Species Clostridium symbiosum [TaxId:1512] from d.142.1.5 Pyruvate phosphate dikinase, N-terminal domain first appeared (with stable ids) in SCOP 1.55
- Species Clostridium symbiosum [TaxId:1512] from d.142.1.5 Pyruvate phosphate dikinase, N-terminal domain appears in SCOPe 2.06
- Species Clostridium symbiosum [TaxId:1512] from d.142.1.5 Pyruvate phosphate dikinase, N-terminal domain appears in the current release, SCOPe 2.08