SCOPe 2.06: Family d.139.1.1: PurM C-terminal domain-like

Lineage for Family d.139.1.1: PurM C-terminal domain-like

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.139: PurM C-terminal domain-like [56041] (1 superfamily)
   3 layers: alpha/beta/alpha; partial topological similarity to the ferredoxin-like fold

4. Superfamily d.139.1: PurM C-terminal domain-like [56042] (2 families)

5. Family d.139.1.1: PurM C-terminal domain-like [56043] (7 proteins)

Proteins:

1. Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain [56044] (2 species)

   1. Species Escherichia coli [TaxId:562] [56045] (1 PDB entry)

   2. Species Francisella tularensis [TaxId:177416] [225919] (1 PDB entry)

2. FGAM synthase PurL, PurM-like module, C1 and C2 domains [111181] (3 species)

   1. Species Salmonella enterica [TaxId:90371] [227353] (2 PDB entries)

   2. Species Salmonella typhimurium [TaxId:90371] [111182] (1 PDB entry)
      Uniprot P74881

   3. Species Salmonella typhimurium [TaxId:99287] [229692] (1 PDB entry)

3. Hydrogenase expression/formation protein HypE [160783] (1 species)

   • Species Thermococcus kodakaraensis [TaxId:311400] [160784] (3 PDB entries)
     Uniprot Q5JII7 156-334

4. Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 [103260] (1 species)
   duplication: tandem repeats of two PurM-like units arranged like the PurM subunits in the dimer

   • Species Thermotoga maritima [TaxId:2336] [103261] (7 PDB entries)
     TM1246

5. Selenide, water dikinase SelD [160785] (1 species)

   • Species Aquifex aeolicus [TaxId:63363] [160786] (4 PDB entries)
     Uniprot O67139 155-336

6. Thiamine monophosphate kinase (ThiL) C-terminal domain [118111] (1 species)

   • Species Aquifex aeolicus [TaxId:63363] [118112] (5 PDB entries)
     Uniprot O67883

7. automated matches [310848] (1 species)
   not a true protein

   • Species Aquifex aeolicus [311196] (1 PDB entry)

More info for Family d.139.1.1: PurM C-terminal domain-like

Timeline for Family d.139.1.1: PurM C-terminal domain-like:

• Family d.139.1.1: PurM C-terminal domain-like first appeared (with stable ids) in SCOP 1.55, called Family d.139.1.1: Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain
  
• Family d.139.1.1: PurM C-terminal domain-like appears in SCOPe 2.05
  
• Family d.139.1.1: PurM C-terminal domain-like appears in SCOPe 2.07
  
• Family d.139.1.1: PurM C-terminal domain-like appears in the current release, SCOPe 2.08