Lineage for Family d.131.1.2: DNA polymerase processivity factor

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1927131Fold d.131: DNA clamp [55978] (1 superfamily)
    contains two helices and two beta sheets
    duplication: fold has internal pseudo two-fold symmetry
  4. 1927132Superfamily d.131.1: DNA clamp [55979] (3 families) (S)
  5. 1927317Family d.131.1.2: DNA polymerase processivity factor [55983] (5 proteins)
    duplication: consists of two domains of this fold

Proteins:

  1. 1927318gp45 sliding clamp [55984] (2 species)
    1. 1927319Species Bacteriophage RB69 [TaxId:12353] [55985] (2 PDB entries)
    2. 1927332Species Bacteriophage T4 [TaxId:10665] [55986] (1 PDB entry)
  2. 1927339Proliferating cell nuclear antigen (PCNA) [55989] (7 species)
    1. 1927340Species Archaeoglobus fulgidus [TaxId:2234] [103254] (3 PDB entries)
    2. 1927347Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55990] (6 PDB entries)
      Uniprot P15873
    3. 1927368Species Haloferax volcanii [TaxId:2246] [225733] (1 PDB entry)
    4. 1927375Species Human (Homo sapiens) [TaxId:9606] [55991] (9 PDB entries)
      Uniprot P12004
    5. 1927426Species Pyrococcus furiosus [TaxId:2261] [55992] (4 PDB entries)
    6. 1927437Species Saccharomyces cerevisiae [TaxId:559292] [270905] (1 PDB entry)
    7. 1927440Species Sulfolobus tokodaii [TaxId:111955] [111175] (1 PDB entry)
      Uniprot Q975N2
  3. 1927449UL42 [55987] (1 species)
  4. 1927459UL44 [111176] (1 species)
  5. 1927465automated matches [227006] (4 species)
    not a true protein
    1. 1927466Species Archaeoglobus fulgidus [TaxId:2234] [256015] (1 PDB entry)
    2. 1927473Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [232312] (4 PDB entries)
    3. 1927480Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233826] (5 PDB entries)
    4. 1927497Species Pyrococcus furiosus [TaxId:2261] [225778] (1 PDB entry)

More info for Family d.131.1.2: DNA polymerase processivity factor

Timeline for Family d.131.1.2: DNA polymerase processivity factor: