Class d: Alpha and beta proteins (a+b) [53931] (385 folds) |
Fold d.129: TBP-like [55944] (11 superfamilies) beta-alpha-beta(4)-alpha |
Superfamily d.129.3: Bet v1-like [55961] (11 families) contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix |
Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (7 proteins) Pfam PF00848; contains a few insertion and C-terminal extension compared with Bet v1 |
Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970] (5 species) |
Pseudomonas putida [TaxId:303] [55971] (10 PDB entries) |
Domain d1eg9a2: 1eg9 A:155-447 [41322] Other proteins in same PDB: d1eg9a1, d1eg9b_ complexed with fe, fes, ind, so4 |
Domain d1ndoa2: 1ndo A:155-447 [41323] Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_ complexed with fe, fes |
Domain d1ndoc2: 1ndo C:155-447 [41324] Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_ complexed with fe, fes |
Domain d1ndoe2: 1ndo E:155-445 [41325] Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_ complexed with fe, fes |
Domain d1o7ga2: 1o7g A:155-448 [81135] Other proteins in same PDB: d1o7ga1, d1o7gb_ complexed with edo, fe, fes, npy, so4 |
Domain d1o7ha2: 1o7h A:155-448 [81138] Other proteins in same PDB: d1o7ha1, d1o7hb_ complexed with edo, fe, fes, so4 |
Domain d1o7ma2: 1o7m A:155-448 [81160] Other proteins in same PDB: d1o7ma1, d1o7mb_ complexed with edo, fe, fes, oxy, so4 |
Domain d1o7na2: 1o7n A:155-448 [81163] Other proteins in same PDB: d1o7na1, d1o7nb_ complexed with edo, fe, fes, ind, oxy, so4 |
Domain d1o7pa2: 1o7p A:155-447 [81166] Other proteins in same PDB: d1o7pa1, d1o7pb_ complexed with edo, fe, fes, ndh, so4 |
Domain d1o7wa2: 1o7w A:155-447 [81169] Other proteins in same PDB: d1o7wa1, d1o7wb_ complexed with edo, fe, fes, so4 |
Domain d1uuva2: 1uuv A:155-447 [119700] Other proteins in same PDB: d1uuva1, d1uuvb_ automated match to d1o7na2 complexed with edo, fe, fes, ind, no, so4 |
Domain d1uuwa2: 1uuw A:155-447 [119703] Other proteins in same PDB: d1uuwa1, d1uuwb_ automated match to d1o7na2 complexed with fe, fes, no, so4 |
Domain d2hmja2: 2hmj A:155-446 [136586] Other proteins in same PDB: d2hmja1, d2hmjb_ automated match to d1eg9a2 complexed with edo, fe, fes, so4; mutant |
Domain d2hmla2: 2hml A:155-446 [136592] Other proteins in same PDB: d2hmla1, d2hmlb_ automated match to d1eg9a2 complexed with edo, fe, fes, pey, so4; mutant |
Domain d2hmna2: 2hmn A:155-446 [136598] Other proteins in same PDB: d2hmna1, d2hmnb_ automated match to d1eg9a2 complexed with an3, edo, fe, fes, so4; mutant |
Pseudomonas sp. [TaxId:69011] [228600] (14 PDB entries) |
Domain d2hmka2: 2hmk A:155-446 [136589] Other proteins in same PDB: d2hmka1, d2hmkb_ automated match to d1o7na2 complexed with edo, fe, fes, pey, so4 |
Domain d2hmma2: 2hmm A:155-446 [136595] Other proteins in same PDB: d2hmma1, d2hmmb_ automated match to d1o7na2 complexed with an3, edo, fe, fes, so4 |
Domain d2hmoa2: 2hmo A:155-446 [136601] Other proteins in same PDB: d2hmoa1, d2hmob_ automated match to d1o7na2 complexed with 3nt, edo, fe, fes, so4 |
Domain d4hjla2: 4hjl A:155-446 [228309] Other proteins in same PDB: d4hjla1, d4hjlb_ automated match to d1eg9a2 complexed with 15o, edo, fe, fes, so4 |
Domain d4hkva2: 4hkv A:155-446 [228601] Other proteins in same PDB: d4hkva1, d4hkvb_ automated match to d1o7na2 complexed with edo, fe, fes, so4, unu |
Domain d4hm0a2: 4hm0 A:155-448 [228627] Other proteins in same PDB: d4hm0a1, d4hm0b_ automated match to d1o7na2 complexed with edo, fe, fes, iac, so4 |
Domain d4hm1a2: 4hm1 A:155-446 [228615] Other proteins in same PDB: d4hm1a1, d4hm1b_ automated match to d1o7na2 complexed with 1on, edo, fe, fes, so4 |
Domain d4hm2a2: 4hm2 A:155-446 [228609] Other proteins in same PDB: d4hm2a1, d4hm2b_ automated match to d1o7na2 complexed with 16m, edo, fe, fes, so4 |
Domain d4hm3a2: 4hm3 A:155-446 [228619] Other proteins in same PDB: d4hm3a1, d4hm3b_ automated match to d1o7na2 complexed with edo, fe, fes, pyj, so4 |
Domain d4hm4a2: 4hm4 A:155-446 [228603] Other proteins in same PDB: d4hm4a1, d4hm4b_ automated match to d1o7na2 complexed with 16n, edo, fe, fes, so4 |
Domain d4hm5a2: 4hm5 A:155-446 [228613] Other proteins in same PDB: d4hm5a1, d4hm5b_ automated match to d1o7na2 complexed with 16n, edo, fe, fes, so4 |
Domain d4hm6a2: 4hm6 A:155-446 [228622] Other proteins in same PDB: d4hm6a1, d4hm6b_ automated match to d1o7na2 complexed with 16q, edo, fe, fes, so4 |
Domain d4hm7a2: 4hm7 A:155-446 [228625] Other proteins in same PDB: d4hm7a1, d4hm7b_ automated match to d1o7na2 complexed with edo, fe, fes, so4, syn |
Domain d4hm8a2: 4hm8 A:155-446 [228605] Other proteins in same PDB: d4hm8a1, d4hm8b_ automated match to d1o7na2 complexed with 16r, edo, fe, fes, so4 |
Rhodococcus sp. ncimb12038 [TaxId:92694] [143822] (1 PDB entry) Uniprot Q9X3R9 163-441 |
Domain d2b1xa2: 2b1x A:163-441 [127676] Other proteins in same PDB: d2b1xa1, d2b1xb1, d2b1xc1, d2b1xd_, d2b1xe1, d2b1xf_ complexed with fe, fes, mpd |
Domain d2b1xc2: 2b1x C:163-441 [127679] Other proteins in same PDB: d2b1xa1, d2b1xb1, d2b1xc1, d2b1xd_, d2b1xe1, d2b1xf_ automated match to d2b1xa2 complexed with fe, fes, mpd |
Domain d2b1xe2: 2b1x E:163-441 [127682] Other proteins in same PDB: d2b1xa1, d2b1xb1, d2b1xc1, d2b1xd_, d2b1xe1, d2b1xf_ automated match to d2b1xa2 complexed with fe, fes, mpd |
Domain d2b24a2: 2b24 A:163-440 [127691] Other proteins in same PDB: d2b24a1, d2b24b_, d2b24c1, d2b24d_, d2b24e1, d2b24f_ automated match to d2b1xa2 complexed with fe, fes, ind |
Domain d2b24c2: 2b24 C:163-440 [127694] Other proteins in same PDB: d2b24a1, d2b24b_, d2b24c1, d2b24d_, d2b24e1, d2b24f_ automated match to d2b1xa2 complexed with fe, fes, ind |
Domain d2b24e2: 2b24 E:163-440 [127697] Other proteins in same PDB: d2b24a1, d2b24b_, d2b24c1, d2b24d_, d2b24e1, d2b24f_ automated match to d2b1xa2 complexed with fe, fes, ind |
Timeline for Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain: