SCOPe 2.03: Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like

Lineage for Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.129: TBP-like [55944] (11 superfamilies)
   beta-alpha-beta(4)-alpha

4. Superfamily d.129.3: Bet v1-like [55961] (11 families)
   contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix

5. Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like [55962] (5 proteins)

Proteins:

1. Hypothetical protein At1G24000 [103251] (1 species)

   • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [103252] (2 PDB entries)

2. Major allergen api g 1 [143819] (1 species)

   • Species Celery (Apium graveolens) [TaxId:4045] [143820] (1 PDB entry)
     Uniprot P49372 2-154

3. Major tree pollen allergen [55963] (4 species)

   1. Species European white birch (Betula pendula), Bet v 1-l [TaxId:3505] [82782] (1 PDB entry)

   2. Species European white birch (Betula pendula), Bet v I-a [TaxId:3505] [55965] (1 PDB entry)

   3. Species Sweet cherry (Prunus avium), pru av 1 [TaxId:42229] [64387] (2 PDB entries)

   4. Species White birch (Betula verrucosa), Bet v 1 [TaxId:3505] [55964] (18 PDB entries)

4. Plant pathogenesis-related protein PR10 [75543] (2 species)

   1. Species Jicama (Pachyrhizus erosus), SPE-16 [TaxId:109171] [143818] (1 PDB entry)
      Uniprot Q6T6J0 2-148

   2. Species Yellow lupine (Lupinus luteus) [TaxId:3873] [75544] (3 PDB entries)

5. automated matches [190058] (4 species)
   not a true protein

   1. Species Betula pendula [TaxId:3505] [195294] (3 PDB entries)

   2. Species Carrot (Daucus carota) [TaxId:4039] [189035] (1 PDB entry)

   3. Species Pachyrhizus erosus [TaxId:109171] [186778] (2 PDB entries)

   4. Species Yellow lupine (Lupinus luteus) [TaxId:3873] [186854] (2 PDB entries)

More info for Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like

Timeline for Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like:

• Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like first appeared (with stable ids) in SCOP 1.55, called Family d.129.3.1: Major birch pollen allergen Bet v 1
  
• Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like appears in SCOPe 2.02
  
• Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like appears in SCOPe 2.04
  
• Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like appears in the current release, SCOPe 2.08