Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538746Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2538747Superfamily d.129.1: TATA-box binding protein-like [55945] (3 families) (S)
  5. 2538748Family d.129.1.1: TATA-box binding protein (TBP), C-terminal domain [55946] (1 protein)
    duplication: consists of two clear structural repeats
    automatically mapped to Pfam PF00352
  6. 2538749Protein TATA-box binding protein (TBP), C-terminal domain [55947] (5 species)
    structure of the N-terminal domain is not known yet
  7. 2538750Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55950] (7 PDB entries)

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]:

  1. Domain(s) for 1ngm:
    1. 2538765Domain d1ngma1: 1ngm A:61-155 [85685]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
    2. 2538766Domain d1ngma2: 1ngm A:156-240 [85686]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
    3. 2538767Domain d1ngme1: 1ngm E:61-155 [85688]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
    4. 2538768Domain d1ngme2: 1ngm E:156-240 [85689]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
    5. 2538769Domain d1ngmi1: 1ngm I:61-155 [85691]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
    6. 2538770Domain d1ngmi2: 1ngm I:156-240 [85692]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
    7. 2538771Domain d1ngmm1: 1ngm M:61-155 [85694]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
    8. 2538772Domain d1ngmm2: 1ngm M:156-240 [85695]
      Other proteins in same PDB: d1ngmb1, d1ngmb2, d1ngmf1, d1ngmf2, d1ngmj_, d1ngmn_
      a ternary complex with DNA and Brf1 peptide
      protein/DNA complex
  2. Domain(s) for 1nh2:
    1. 2538755Domain d1nh2a1: 1nh2 A:61-155 [91872]
      Other proteins in same PDB: d1nh2b_, d1nh2c_, d1nh2d1, d1nh2d2
      protein/DNA complex
    2. 2538756Domain d1nh2a2: 1nh2 A:156-240 [91873]
      Other proteins in same PDB: d1nh2b_, d1nh2c_, d1nh2d1, d1nh2d2
      protein/DNA complex
  3. Domain(s) for 1rm1:
    1. 2538757Domain d1rm1a1: 1rm1 A:61-148 [118778]
      Other proteins in same PDB: d1rm1b1, d1rm1b2
      automated match to d1mp9b1
      protein/DNA complex
    2. 2538758Domain d1rm1a2: 1rm1 A:149-240 [118779]
      Other proteins in same PDB: d1rm1b1, d1rm1b2
      automated match to d1mp9b2
      protein/DNA complex
  4. Domain(s) for 1tba:
    1. 2538773Domain d1tbab1: 1tba B:61-155 [41286]
      Other proteins in same PDB: d1tbaa_
    2. 2538774Domain d1tbab2: 1tba B:156-240 [41287]
      Other proteins in same PDB: d1tbaa_
  5. Domain(s) for 1tbp:
    1. 2538761Domain d1tbpa1: 1tbp A:61-155 [41282]
    2. 2538762Domain d1tbpa2: 1tbp A:156-240 [41283]
    3. 2538763Domain d1tbpb1: 1tbp B:61-155 [41284]
    4. 2538764Domain d1tbpb2: 1tbp B:156-240 [41285]
  6. Domain(s) for 1ytb:
    1. 2538751Domain d1ytba1: 1ytb A:61-155 [41276]
      complexed with DNA containing TATA-box
      protein/DNA complex
    2. 2538752Domain d1ytba2: 1ytb A:156-240 [41277]
      complexed with DNA containing TATA-box
      protein/DNA complex
    3. 2538753Domain d1ytbb1: 1ytb B:61-155 [41278]
      complexed with DNA containing TATA-box
      protein/DNA complex
    4. 2538754Domain d1ytbb2: 1ytb B:156-240 [41279]
      complexed with DNA containing TATA-box
      protein/DNA complex
  7. Domain(s) for 1ytf:
    1. 2538759Domain d1ytfa1: 1ytf A:61-155 [41280]
      Other proteins in same PDB: d1ytfb_, d1ytfc_, d1ytfd1, d1ytfd2
      protein/DNA complex
    2. 2538760Domain d1ytfa2: 1ytf A:156-240 [41281]
      Other proteins in same PDB: d1ytfb_, d1ytfc_, d1ytfd1, d1ytfd2
      protein/DNA complex

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from d.129.1.1 TATA-box binding protein (TBP), C-terminal domain

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from d.129.1.1 TATA-box binding protein (TBP), C-terminal domain: