Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538746Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2538747Superfamily d.129.1: TATA-box binding protein-like [55945] (3 families) (S)
  5. 2538748Family d.129.1.1: TATA-box binding protein (TBP), C-terminal domain [55946] (1 protein)
    duplication: consists of two clear structural repeats
    automatically mapped to Pfam PF00352
  6. 2538749Protein TATA-box binding protein (TBP), C-terminal domain [55947] (5 species)
    structure of the N-terminal domain is not known yet
  7. 2538808Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [55949] (13 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 1qn3:
    1. 2538833Domain d1qn3a1: 1qn3 A:16-115 [41250]
    2. 2538834Domain d1qn3a2: 1qn3 A:116-198 [41251]
    3. 2538835Domain d1qn3b1: 1qn3 B:12-115 [41252]
    4. 2538836Domain d1qn3b2: 1qn3 B:116-198 [41253]
  2. Domain(s) for 1qn4:
    1. 2538817Domain d1qn4a1: 1qn4 A:16-115 [41238]
    2. 2538818Domain d1qn4a2: 1qn4 A:116-198 [41239]
    3. 2538819Domain d1qn4b1: 1qn4 B:12-115 [41240]
    4. 2538820Domain d1qn4b2: 1qn4 B:116-198 [41241]
  3. Domain(s) for 1qn5:
    1. 2538821Domain d1qn5a1: 1qn5 A:16-115 [41234]
    2. 2538822Domain d1qn5a2: 1qn5 A:116-198 [41235]
    3. 2538823Domain d1qn5b1: 1qn5 B:12-115 [41236]
    4. 2538824Domain d1qn5b2: 1qn5 B:116-197 [41237]
  4. Domain(s) for 1qn6:
    1. 2538841Domain d1qn6a1: 1qn6 A:15-115 [41254]
    2. 2538842Domain d1qn6a2: 1qn6 A:116-198 [41255]
    3. 2538843Domain d1qn6b1: 1qn6 B:12-115 [41256]
    4. 2538844Domain d1qn6b2: 1qn6 B:116-198 [41257]
  5. Domain(s) for 1qn7:
    1. 2538845Domain d1qn7a1: 1qn7 A:13-115 [41262]
    2. 2538846Domain d1qn7a2: 1qn7 A:116-198 [41263]
    3. 2538847Domain d1qn7b1: 1qn7 B:12-115 [41264]
    4. 2538848Domain d1qn7b2: 1qn7 B:116-197 [41265]
  6. Domain(s) for 1qn8:
    1. 2538837Domain d1qn8a1: 1qn8 A:16-115 [41258]
    2. 2538838Domain d1qn8a2: 1qn8 A:116-198 [41259]
    3. 2538839Domain d1qn8b1: 1qn8 B:12-115 [41260]
    4. 2538840Domain d1qn8b2: 1qn8 B:116-198 [41261]
  7. Domain(s) for 1qn9:
    1. 2538813Domain d1qn9a1: 1qn9 A:16-115 [41230]
    2. 2538814Domain d1qn9a2: 1qn9 A:116-198 [41231]
    3. 2538815Domain d1qn9b1: 1qn9 B:12-115 [41232]
    4. 2538816Domain d1qn9b2: 1qn9 B:116-197 [41233]
  8. Domain(s) for 1qna:
    1. 2538809Domain d1qnaa1: 1qna A:17-115 [41226]
    2. 2538810Domain d1qnaa2: 1qna A:116-198 [41227]
    3. 2538811Domain d1qnab1: 1qna B:12-115 [41228]
    4. 2538812Domain d1qnab2: 1qna B:116-197 [41229]
  9. Domain(s) for 1qnb:
    1. 2538849Domain d1qnba1: 1qnb A:16-115 [41266]
    2. 2538850Domain d1qnba2: 1qnb A:116-198 [41267]
    3. 2538851Domain d1qnbb1: 1qnb B:12-115 [41268]
    4. 2538852Domain d1qnbb2: 1qnb B:116-198 [41269]
  10. Domain(s) for 1qnc:
    1. 2538853Domain d1qnca1: 1qnc A:16-115 [41270]
    2. 2538854Domain d1qnca2: 1qnc A:116-198 [41271]
    3. 2538855Domain d1qncb1: 1qnc B:12-115 [41272]
    4. 2538856Domain d1qncb2: 1qnc B:116-198 [41273]
  11. Domain(s) for 1qne:
    1. 2538829Domain d1qnea1: 1qne A:12-115 [41246]
    2. 2538830Domain d1qnea2: 1qne A:116-198 [41247]
    3. 2538831Domain d1qneb1: 1qne B:11-115 [41248]
    4. 2538832Domain d1qneb2: 1qne B:116-198 [41249]
  12. Domain(s) for 1vok:
    1. 2538825Domain d1voka1: 1vok A:7-115 [41242]
      complexed with so4
    2. 2538826Domain d1voka2: 1vok A:116-198 [41243]
      complexed with so4
    3. 2538827Domain d1vokb1: 1vok B:12-115 [41244]
      complexed with so4
    4. 2538828Domain d1vokb2: 1vok B:116-199 [41245]
      complexed with so4
  13. Domain(s) for 1vol:
    1. 2538857Domain d1volb1: 1vol B:12-115 [41274]
      Other proteins in same PDB: d1vola1, d1vola2
      protein/DNA complex
    2. 2538858Domain d1volb2: 1vol B:116-198 [41275]
      Other proteins in same PDB: d1vola1, d1vola2
      protein/DNA complex

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.129.1.1 TATA-box binding protein (TBP), C-terminal domain

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.129.1.1 TATA-box binding protein (TBP), C-terminal domain: