SCOPe 2.08: Family d.116.1.1: YbaK/ProRS associated domain

Lineage for Family d.116.1.1: YbaK/ProRS associated domain

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.116: YbaK/ProRS associated domain [55825] (1 superfamily)
   core: alpha-beta-alpha-beta(2)-(alpha-beta)2-alpha-beta(2)-alpha-beta; 3 layers; bifurcated mixed sheet

4. Superfamily d.116.1: YbaK/ProRS associated domain [55826] (2 families)

5. Family d.116.1.1: YbaK/ProRS associated domain [55827] (4 proteins)
   Pfam PF04073

Proteins:

1. Hypothetical protein APE2540 [118085] (1 species)

   • Species Aeropyrum pernix [TaxId:56636] [118086] (1 PDB entry)
     Uniprot Q9Y8U3

2. Hypothetical protein Atu3699 [111136] (1 species)

   • Species Agrobacterium tumefaciens, strain C58 [TaxId:358] [111137] (1 PDB entry)
     Uniprot Q8U9M7

3. Hypothetical protein CC0111 [103220] (1 species)
   annotated as putative DNA-binding protein

   • Species Caulobacter crescentus [TaxId:155892] [103221] (2 PDB entries)

4. Hypothetical protein HI1434 (YbaK homologue) [55828] (1 species)

   • Species Haemophilus influenzae [TaxId:727] [55829] (2 PDB entries)

More info for Family d.116.1.1: YbaK/ProRS associated domain

Timeline for Family d.116.1.1: YbaK/ProRS associated domain:

• Family d.116.1.1: YbaK/ProRS associated domain first appeared (with stable ids) in SCOP 1.55, called Family d.116.1.1: Hypothetica protein HI1434 (YbaK homologue)
  
• Family d.116.1.1: YbaK/ProRS associated domain appears in SCOPe 2.07