SCOPe 2.08: Family d.115.1.1: YrdC-like

Lineage for Family d.115.1.1: YrdC-like

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.115: YrdC/RibB [55820] (1 superfamily)
   core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other

4. Superfamily d.115.1: YrdC/RibB [55821] (3 families)

5. Family d.115.1.1: YrdC-like [55822] (3 proteins)
   contains two additional strands in the C-terminal extension
   automatically mapped to Pfam PF01300

Proteins:

1. Hypothetical protein MTH1692 [75531] (1 species)

   • Species Methanobacterium thermoautotrophicum [TaxId:145262] [75532] (1 PDB entry)

2. Hypothetical protein YciO [75529] (1 species)

   • Species Escherichia coli [TaxId:562] [75530] (2 PDB entries)

3. Hypothetical protein YrdC [55823] (2 species)

   1. Species Escherichia coli [TaxId:562] [55824] (1 PDB entry)

   2. Species Escherichia coli [TaxId:83333] [273890] (1 PDB entry)

More info for Family d.115.1.1: YrdC-like

Timeline for Family d.115.1.1: YrdC-like:

• Family d.115.1.1: YrdC-like first appeared (with stable ids) in SCOP 1.55, called Family d.115.1.1: Hypothetica protein YrdC
  
• Family d.115.1.1: YrdC-like appears in SCOPe 2.07