Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2207154Fold d.95: Homing endonuclease-like [55603] (2 superfamilies)
    alpha-beta(2)-alpha-beta(2)-alpha; 2 layers: a/b; antiparallel sheet 1243
  4. 2207165Superfamily d.95.2: Homing endonucleases [55608] (3 families) (S)
  5. 2207259Family d.95.2.2: Intein endonuclease [55614] (2 proteins)
    duplication: contains tandem repeat of this fold
  6. 2207264Protein VMA1-derived endonuclease (VDE) PI-SceI [55615] (1 species)
    homing endonuclease with protein splicing activity
  7. 2207265Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55616] (7 PDB entries)
    Uniprot P17255 284-737

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]:

  1. Domain(s) for 1dfa:
    1. 2207270Domain d1dfaa2: 1dfa A:181-298 [40575]
      Other proteins in same PDB: d1dfaa1
    2. 2207271Domain d1dfaa3: 1dfa A:299-415 [40576]
      Other proteins in same PDB: d1dfaa1
  2. Domain(s) for 1ef0:
    1. 2207272Domain d1ef0a2: 1ef0 A:181-298 [40577]
      Other proteins in same PDB: d1ef0a1, d1ef0b1
      complexed with zn
    2. 2207273Domain d1ef0a3: 1ef0 A:299-415 [40578]
      Other proteins in same PDB: d1ef0a1, d1ef0b1
      complexed with zn
    3. 2207274Domain d1ef0b2: 1ef0 B:181-298 [40579]
      Other proteins in same PDB: d1ef0a1, d1ef0b1
      complexed with zn
    4. 2207275Domain d1ef0b3: 1ef0 B:299-415 [40580]
      Other proteins in same PDB: d1ef0a1, d1ef0b1
      complexed with zn
  3. Domain(s) for 1jva:
    1. 2207266Domain d1jvaa2: 1jva A:464-581 [77176]
      Other proteins in same PDB: d1jvaa1, d1jvab1
    2. 2207267Domain d1jvaa3: 1jva A:582-698 [77177]
      Other proteins in same PDB: d1jvaa1, d1jvab1
    3. 2207268Domain d1jvab2: 1jva B:464-581 [77179]
      Other proteins in same PDB: d1jvaa1, d1jvab1
    4. 2207269Domain d1jvab3: 1jva B:582-698 [77180]
      Other proteins in same PDB: d1jvaa1, d1jvab1
  4. Domain(s) for 1lws:
    1. 2207286Domain d1lwsa2: 1lws A:181-298 [78276]
      Other proteins in same PDB: d1lwsa1
      protein/DNA complex; complexed with ca
    2. 2207287Domain d1lwsa3: 1lws A:299-415 [78277]
      Other proteins in same PDB: d1lwsa1
      protein/DNA complex; complexed with ca
  5. Domain(s) for 1lwt:
    1. 2207284Domain d1lwta2: 1lwt A:181-298 [78279]
      Other proteins in same PDB: d1lwta1
      protein/DNA complex
    2. 2207285Domain d1lwta3: 1lwt A:299-415 [78280]
      Other proteins in same PDB: d1lwta1
      protein/DNA complex
  6. Domain(s) for 1um2:
    1. 2207280Domain d1um2a2: 1um2 A:464-581 [107947]
      Other proteins in same PDB: d1um2a1, d1um2b1
    2. 2207281Domain d1um2a3: 1um2 A:582-698 [107948]
      Other proteins in same PDB: d1um2a1, d1um2b1
    3. 2207282Domain d1um2b2: 1um2 B:464-581 [107950]
      Other proteins in same PDB: d1um2a1, d1um2b1
    4. 2207283Domain d1um2b3: 1um2 B:582-698 [107951]
      Other proteins in same PDB: d1um2a1, d1um2b1
  7. Domain(s) for 1vde:
    1. 2207276Domain d1vdea2: 1vde A:181-298 [40581]
      Other proteins in same PDB: d1vdea1, d1vdeb1
    2. 2207277Domain d1vdea3: 1vde A:299-415 [40582]
      Other proteins in same PDB: d1vdea1, d1vdeb1
    3. 2207278Domain d1vdeb2: 1vde B:181-298 [40583]
      Other proteins in same PDB: d1vdea1, d1vdeb1
    4. 2207279Domain d1vdeb3: 1vde B:299-415 [40584]
      Other proteins in same PDB: d1vdea1, d1vdeb1

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from d.95.2.2 VMA1-derived endonuclease (VDE) PI-SceI

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from d.95.2.2 VMA1-derived endonuclease (VDE) PI-SceI: