SCOP 1.63: Family d.92.1.11: Matrix metalloproteases, catalytic domain

Lineage for Family d.92.1.11: Matrix metalloproteases, catalytic domain

1. Root: SCOP 1.63

2. Class d: Alpha and beta proteins (a+b) [53931] (224 folds)

3. Fold d.92: Zincin-like [55485] (2 superfamilies)
   contains mixed beta sheet with connection over free side of the sheet

4. Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (14 families)

5. Family d.92.1.11: Matrix metalloproteases, catalytic domain [55528] (11 proteins)

Proteins:

1. Collagenase-3 (MMP-13) [55540] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [55541] (5 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [55542] (1 PDB entry)

2. Fibroblast collagenase (MMP-1) [55529] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [55530] (10 PDB entries)

   2. Species Pig (Sus scrofa) [TaxId:9823] [55531] (1 PDB entry)

3. Gelatinase A [55534] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [55535] (4 PDB entries)

4. Gelatinase B (MMP-9) [75496] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [75497] (3 PDB entries)

5. Macrophage elastase (MMP-12) [69780] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [69781] (2 PDB entries)

6. Matrilysin (MMP-7) [55538] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [55539] (3 PDB entries)

7. Membrane-type matrix metalloproteinase (CDMT1-MMP) [55543] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [55544] (2 PDB entries)

8. MMP-2 [69778] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [69779] (1 PDB entry)

9. Neutrophil collagenase (MMP-8) [55532] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [55533] (14 PDB entries)

10. Stromelysin-1 (MMP-3) [55536] (1 species)

    • Species Human (Homo sapiens), fibroblast [TaxId:9606] [55537] (30 PDB entries)

11. Stromelysin-3 (MMP-11) [64341] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [64342] (1 PDB entry)

More info for Family d.92.1.11: Matrix metalloproteases, catalytic domain

Timeline for Family d.92.1.11: Matrix metalloproteases, catalytic domain:

• Family d.92.1.11: Matrix metalloproteases, catalytic domain first appeared (with stable ids) in SCOP 1.55
  
• Family d.92.1.11: Matrix metalloproteases, catalytic domain appears in SCOP 1.61
  
• Family d.92.1.11: Matrix metalloproteases, catalytic domain appears in SCOP 1.65
  
• Family d.92.1.11: Matrix metalloproteases, catalytic domain appears in the current release, SCOPe 2.08