SCOPe 2.04: Protein: Diaminopimelic acid dehydrogenase (DAPDH)

Lineage for Protein: Diaminopimelic acid dehydrogenase (DAPDH)

Root: SCOPe 2.04
Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
Fold d.81: FwdE/GAPDH domain-like [55346] (4 superfamilies)
core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families)
N-terminal domain is the classic Rossmann-fold
Family d.81.1.3: Dihydrodipicolinate reductase-like [55368] (6 proteins)

Protein Diaminopimelic acid dehydrogenase (DAPDH) [55369] (1 species)
distantly related to dihydrodipicolinate reductase
larger alpha+beta subdomain substitutes for one helix and one strand of the common fold

Species:

Corynebacterium glutamicum [TaxId:1718] [55370] (4 PDB entries)
1. Domains for 1dap:
  1. Domain d1dapa2: 1dap A:119-268 [39968]
    Other proteins in same PDB: d1dapa1, d1dapb1
    complexed with act, ndp
  2. Domain d1dapb2: 1dap B:119-268 [39969]
    Other proteins in same PDB: d1dapa1, d1dapb1
    complexed with act, ndp
2. Domains for 1f06:
  1. Domain d1f06a2: 1f06 A:119-268 [59557]
    Other proteins in same PDB: d1f06a1, d1f06b1
    complexed with 2np, ndp
  2. Domain d1f06b2: 1f06 B:619-768 [59559]
    Other proteins in same PDB: d1f06a1, d1f06b1
    complexed with 2np, ndp
3. Domain for 2dap:
  - Domain d2dapa2: 2dap A:119-268 [39965]
    Other proteins in same PDB: d2dapa1
    complexed with api
4. Domains for 3dap:
  1. Domain d3dapa2: 3dap A:119-268 [39966]
    Other proteins in same PDB: d3dapa1, d3dapb1
    complexed with da3, ndp
  2. Domain d3dapb2: 3dap B:119-268 [39967]
    Other proteins in same PDB: d3dapa1, d3dapb1
    complexed with da3, ndp

More info for Protein Diaminopimelic acid dehydrogenase (DAPDH) from d.81.1.3: Dihydrodipicolinate reductase-like

Timeline for Protein Diaminopimelic acid dehydrogenase (DAPDH) from d.81.1.3: Dihydrodipicolinate reductase-like:

Protein Diaminopimelic acid dehydrogenase (DAPDH) from d.81.1.3: Dihydrodipicolinate reductase-like first appeared (with stable ids) in SCOP 1.55
Protein Diaminopimelic acid dehydrogenase (DAPDH) from d.81.1.3: Dihydrodipicolinate reductase-like appears in SCOPe 2.03
Protein Diaminopimelic acid dehydrogenase (DAPDH) from d.81.1.3: Dihydrodipicolinate reductase-like appears in SCOPe 2.05
Protein Diaminopimelic acid dehydrogenase (DAPDH) from d.81.1.3: Dihydrodipicolinate reductase-like appears in the current release, SCOPe 2.08