SCOPe 2.04: Protein: Aspartate beta-semialdehyde dehydrogenase

Lineage for Protein: Aspartate beta-semialdehyde dehydrogenase

Root: SCOPe 2.04
Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
Fold d.81: FwdE/GAPDH domain-like [55346] (4 superfamilies)
core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families)
N-terminal domain is the classic Rossmann-fold
Family d.81.1.1: GAPDH-like [55348] (6 proteins)
has many additional secondary structures
Protein Aspartate beta-semialdehyde dehydrogenase [55361] (4 species)

Species:

Escherichia coli [TaxId:562] [55362] (4 PDB entries)
Uniprot P00353
1. Domains for 1brm:
  1. Domain d1brma2: 1brm A:134-354 [39945]
    Other proteins in same PDB: d1brma1, d1brmb1, d1brmc1
  2. Domain d1brmb2: 1brm B:134-354 [39946]
    Other proteins in same PDB: d1brma1, d1brmb1, d1brmc1
  3. Domain d1brmc2: 1brm C:134-354 [39947]
    Other proteins in same PDB: d1brma1, d1brmb1, d1brmc1
2. Domains for 1gl3:
  1. Domain d1gl3a2: 1gl3 A:134-354 [65283]
    Other proteins in same PDB: d1gl3a1, d1gl3b1
    complexed with cys, ndp
  2. Domain d1gl3b2: 1gl3 B:134-354 [65285]
    Other proteins in same PDB: d1gl3a1, d1gl3b1
    complexed with cys, ndp
3. Domains for 1t4b:
  1. Domain d1t4ba2: 1t4b A:134-354 [106407]
    Other proteins in same PDB: d1t4ba1, d1t4bb1
    complexed with na
  2. Domain d1t4bb2: 1t4b B:134-354 [106409]
    Other proteins in same PDB: d1t4ba1, d1t4bb1
    complexed with na
4. Domains for 1t4d:
  1. Domain d1t4da2: 1t4d A:134-354 [106413]
    Other proteins in same PDB: d1t4da1, d1t4db1, d1t4dc1
  2. Domain d1t4db2: 1t4d B:134-354 [106415]
    Other proteins in same PDB: d1t4da1, d1t4db1, d1t4dc1
  3. Domain d1t4dc2: 1t4d C:134-354 [106417]
    Other proteins in same PDB: d1t4da1, d1t4db1, d1t4dc1
Haemophilus influenzae [TaxId:727] [103103] (12 PDB entries)
Uniprot P44801
1. Domains for 1nwc:
  1. Domain d1nwca2: 1nwc A:134-357 [92230]
    Other proteins in same PDB: d1nwca1, d1nwcb1
  2. Domain d1nwcb2: 1nwc B:134-357 [92232]
    Other proteins in same PDB: d1nwca1, d1nwcb1
2. Domains for 1nwh:
  1. Domain d1nwha2: 1nwh A:134-357 [92234]
    Other proteins in same PDB: d1nwha1, d1nwhb1
  2. Domain d1nwhb2: 1nwh B:134-357 [92236]
    Other proteins in same PDB: d1nwha1, d1nwhb1
3. Domain for 1nx6:
  - Domain d1nx6a2: 1nx6 A:134-357 [92284]
    Other proteins in same PDB: d1nx6a1
    complexed with po4
4. Domain for 1oza:
  - Domain d1ozaa2: 1oza A:134-357 [104046]
    Other proteins in same PDB: d1ozaa1
    mutant
5. Domain for 1pqp:
  - Domain d1pqpa2: 1pqp A:134-357 [104287]
    Other proteins in same PDB: d1pqpa1
    complexed with hse, po4; mutant
6. Domains for 1pqu:
  1. Domain d1pqua2: 1pqu A:134-357 [104289]
    Other proteins in same PDB: d1pqua1, d1pqub1, d1pquc1, d1pqud1
    complexed with cac, cys, nap; mutant
  2. Domain d1pqub2: 1pqu B:134-357 [104291]
    Other proteins in same PDB: d1pqua1, d1pqub1, d1pquc1, d1pqud1
    complexed with cac, cys, nap; mutant
  3. Domain d1pquc2: 1pqu C:134-357 [104293]
    Other proteins in same PDB: d1pqua1, d1pqub1, d1pquc1, d1pqud1
    complexed with cac, cys, nap; mutant
  4. Domain d1pqud2: 1pqu D:134-357 [104295]
    Other proteins in same PDB: d1pqua1, d1pqub1, d1pquc1, d1pqud1
    complexed with cac, cys, nap; mutant
7. Domain for 1pr3:
  - Domain d1pr3a2: 1pr3 A:134-357 [104301]
    Other proteins in same PDB: d1pr3a1
    complexed with po4; mutant
8. Domain for 1ps8:
  - Domain d1ps8a2: 1ps8 A:134-357 [104305]
    Other proteins in same PDB: d1ps8a1
    mutant
9. Domain for 1pu2:
  - Domain d1pu2a2: 1pu2 A:134-357 [104309]
    Other proteins in same PDB: d1pu2a1
    mutant
10. Domains for 1q2x:
  1. Domain d1q2xa2: 1q2x A:134-357 [104504]
    Other proteins in same PDB: d1q2xa1, d1q2xb1
    mutant
  2. Domain d1q2xb2: 1q2x B:134-357 [104506]
    Other proteins in same PDB: d1q2xa1, d1q2xb1
    mutant
11. Domain for 1ta4:
  - Domain d1ta4a2: 1ta4 A:134-357 [112374]
    Other proteins in same PDB: d1ta4a1
    complexed with art
12. Domain for 1tb4:
  - Domain d1tb4a2: 1tb4 A:134-357 [112381]
    Other proteins in same PDB: d1tb4a1
    complexed with pej
Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [143538] (18 PDB entries)
Uniprot Q8DQ00 128-329
1. Domains for 2gyy:
  1. Domain d2gyya2: 2gyy A:128-329 [135880]
    Other proteins in same PDB: d2gyya1, d2gyyb1, d2gyyc1, d2gyyd1
  2. Domain d2gyyb2: 2gyy B:128-329 [135882]
    Other proteins in same PDB: d2gyya1, d2gyyb1, d2gyyc1, d2gyyd1
    automated match to d2gyya2
  3. Domain d2gyyc2: 2gyy C:128-329 [135884]
    Other proteins in same PDB: d2gyya1, d2gyyb1, d2gyyc1, d2gyyd1
    automated match to d2gyya2
  4. Domain d2gyyd2: 2gyy D:128-329 [135886]
    Other proteins in same PDB: d2gyya1, d2gyyb1, d2gyyc1, d2gyyd1
    automated match to d2gyya2
2. Domains for 2gz1:
  1. Domain d2gz1a2: 2gz1 A:128-329 [135888]
    Other proteins in same PDB: d2gz1a1, d2gz1b1
    automated match to d2gyya2
    complexed with nap
  2. Domain d2gz1b2: 2gz1 B:128-329 [135890]
    Other proteins in same PDB: d2gz1a1, d2gz1b1
    automated match to d2gyya2
    complexed with nap
3. Domains for 2gz2:
  1. Domain d2gz2a2: 2gz2 A:128-329 [135892]
    Other proteins in same PDB: d2gz2a1, d2gz2b1
    automated match to d2gyya2
    complexed with a2p
  2. Domain d2gz2b2: 2gz2 B:128-329 [135894]
    Other proteins in same PDB: d2gz2a1, d2gz2b1
    automated match to d2gyya2
    complexed with a2p
4. Domains for 2gz3:
  1. Domain d2gz3a2: 2gz3 A:128-329 [135896]
    Other proteins in same PDB: d2gz3a1, d2gz3b1, d2gz3c1, d2gz3d1
    automated match to d2gyya2
    complexed with as2, nap
  2. Domain d2gz3b2: 2gz3 B:128-329 [197993]
    Other proteins in same PDB: d2gz3a1, d2gz3b1, d2gz3c1, d2gz3d1
    automated match to d2gyya2
    complexed with as2, nap
  3. Domain d2gz3c2: 2gz3 C:128-329 [135898]
    Other proteins in same PDB: d2gz3a1, d2gz3b1, d2gz3c1, d2gz3d1
    automated match to d2gyya2
    complexed with as2, nap
  4. Domain d2gz3d2: 2gz3 D:128-329 [135900]
    Other proteins in same PDB: d2gz3a1, d2gz3b1, d2gz3c1, d2gz3d1
    automated match to d2gyya2
    complexed with as2, nap
5. Domains for 3pwk:
  1. Domain d3pwka2: 3pwk A:128-329 [214955]
    Other proteins in same PDB: d3pwka1, d3pwkb1
    automated match to d2gyya2
    complexed with 25a, edo, l14, na
  2. Domain d3pwkb2: 3pwk B:128-329 [214957]
    Other proteins in same PDB: d3pwka1, d3pwkb1
    automated match to d2gyya2
    complexed with 25a, edo, l14, na
6. Domains for 3pws:
  1. Domain d3pwsa2: 3pws A:128-329 [214959]
    Other proteins in same PDB: d3pwsa1, d3pwsb1
    automated match to d2gyya2
    complexed with 11c, a2p, na
  2. Domain d3pwsb2: 3pws B:128-329 [214961]
    Other proteins in same PDB: d3pwsa1, d3pwsb1
    automated match to d2gyya2
    complexed with 11c, a2p, na
7. Domains for 3pyl:
  1. Domain d3pyla2: 3pyl A:128-329 [214973]
    Other proteins in same PDB: d3pyla1, d3pylb1, d3pylc1, d3pyld1
    automated match to d2gyya2
    complexed with 2ra
  2. Domain d3pylb2: 3pyl B:128-329 [214975]
    Other proteins in same PDB: d3pyla1, d3pylb1, d3pylc1, d3pyld1
    automated match to d2gyya2
    complexed with 2ra
  3. Domain d3pylc2: 3pyl C:128-329 [214977]
    Other proteins in same PDB: d3pyla1, d3pylb1, d3pylc1, d3pyld1
    automated match to d2gyya2
    complexed with 2ra
  4. Domain d3pyld2: 3pyl D:128-329 [214979]
    Other proteins in same PDB: d3pyla1, d3pylb1, d3pylc1, d3pyld1
    automated match to d2gyya2
    complexed with 2ra
8. Domains for 3pyx:
  1. Domain d3pyxa2: 3pyx A:128-329 [214981]
    Other proteins in same PDB: d3pyxa1, d3pyxb1
    automated match to d2gyya2
    complexed with 12t, edo, na, nap
  2. Domain d3pyxb2: 3pyx B:128-329 [214983]
    Other proteins in same PDB: d3pyxa1, d3pyxb1
    automated match to d2gyya2
    complexed with 12t, edo, na, nap
9. Domains for 3pzb:
  1. Domain d3pzba2: 3pzb A:128-329 [214985]
    Other proteins in same PDB: d3pzba1, d3pzbb1
    automated match to d2gyya2
    complexed with 2ra, edo, na, nap
  2. Domain d3pzbb2: 3pzb B:128-329 [214987]
    Other proteins in same PDB: d3pzba1, d3pzbb1
    automated match to d2gyya2
    complexed with 2ra, edo, na, nap
10. Domains for 3q11:
  1. Domain d3q11a2: 3q11 A:128-329 [215018]
    Other proteins in same PDB: d3q11a1, d3q11b1
    automated match to d2gyya2
    complexed with edo, na, nap, p4f
  2. Domain d3q11b2: 3q11 B:128-329 [215020]
    Other proteins in same PDB: d3q11a1, d3q11b1
    automated match to d2gyya2
    complexed with edo, na, nap, p4f
11. Domains for 3q1l:
  1. Domain d3q1la2: 3q1l A:128-329 [215030]
    Other proteins in same PDB: d3q1la1, d3q1lb1, d3q1lc1, d3q1ld1
    automated match to d2gyya2
    complexed with dhl
  2. Domain d3q1lb2: 3q1l B:128-329 [215032]
    Other proteins in same PDB: d3q1la1, d3q1lb1, d3q1lc1, d3q1ld1
    automated match to d2gyya2
    complexed with dhl
  3. Domain d3q1lc2: 3q1l C:128-329 [215034]
    Other proteins in same PDB: d3q1la1, d3q1lb1, d3q1lc1, d3q1ld1
    automated match to d2gyya2
    complexed with dhl
  4. Domain d3q1ld2: 3q1l D:128-329 [215036]
    Other proteins in same PDB: d3q1la1, d3q1lb1, d3q1lc1, d3q1ld1
    automated match to d2gyya2
    complexed with dhl
12. Domains for 4r3n:
  1. Domain d4r3na2: 4r3n A:128-329 [261738]
    Other proteins in same PDB: d4r3na1, d4r3nb1
    automated match to d2gyya2
    complexed with 3gq, act, edo, na, nap
  2. Domain d4r3nb2: 4r3n B:128-329 [261672]
    Other proteins in same PDB: d4r3na1, d4r3nb1
    automated match to d2gyya2
    complexed with 3gq, act, edo, na, nap
13. Domains for 4r3w:
  1. Domain d4r3wa2: 4r3w A:128-329 [261558]
    Other proteins in same PDB: d4r3wa1, d4r3wb1
    automated match to d2gyya2
    complexed with 3gq, a2p, act, edo, na
  2. Domain d4r3wb2: 4r3w B:128-329 [261668]
    Other proteins in same PDB: d4r3wa1, d4r3wb1
    automated match to d2gyya2
    complexed with 3gq, a2p, act, edo, na
14. Domains for 4r41:
  1. Domain d4r41a2: 4r41 A:128-329 [261561]
    Other proteins in same PDB: d4r41a1, d4r41b1
    automated match to d2gyya2
    complexed with 4no, act, edo, na, nap
  2. Domain d4r41b2: 4r41 B:128-329 [261736]
    Other proteins in same PDB: d4r41a1, d4r41b1
    automated match to d2gyya2
    complexed with 4no, act, edo, na, nap
15. Domains for 4r4j:
  1. Domain d4r4ja2: 4r4j A:128-329 [261671]
    Other proteins in same PDB: d4r4ja1, d4r4jb1
    automated match to d2gyya2
    complexed with 3jl, edo, na, nap
  2. Domain d4r4jb2: 4r4j B:128-329 [261563]
    Other proteins in same PDB: d4r4ja1, d4r4jb1
    automated match to d2gyya2
    complexed with 3jl, edo, na, nap
16. Domains for 4r51:
  1. Domain d4r51a2: 4r51 A:128-329 [261567]
    Other proteins in same PDB: d4r51a1, d4r51b1
    automated match to d2gyya2
    complexed with act, edo, na, nap, pht
  2. Domain d4r51b2: 4r51 B:128-329 [261740]
    Other proteins in same PDB: d4r51a1, d4r51b1
    automated match to d2gyya2
    complexed with act, edo, na, nap, pht
17. Domains for 4r54:
  1. Domain d4r54a2: 4r54 A:128-329 [261679]
    Other proteins in same PDB: d4r54a1, d4r54b1
    automated match to d2gyya2
    complexed with 3jm, act, na, nap
  2. Domain d4r54b2: 4r54 B:128-329 [261677]
    Other proteins in same PDB: d4r54a1, d4r54b1
    automated match to d2gyya2
    complexed with 3jm, act, na, nap
18. Domains for 4r5h:
  1. Domain d4r5ha2: 4r5h A:128-329 [261676]
    Other proteins in same PDB: d4r5ha1, d4r5hb1
    automated match to d2gyya2
    complexed with 3jn, edo, na, nap
  2. Domain d4r5hb2: 4r5h B:128-329 [261742]
    Other proteins in same PDB: d4r5ha1, d4r5hb1
    automated match to d2gyya2
    complexed with 3jn, edo, na, nap
Vibrio cholerae [TaxId:666] [82725] (4 PDB entries)
1. Domains for 1mb4:
  1. Domain d1mb4a2: 1mb4 A:133-354 [78909]
    Other proteins in same PDB: d1mb4a1, d1mb4b1
    complexed with cys, ndp
  2. Domain d1mb4b2: 1mb4 B:133-354 [78911]
    Other proteins in same PDB: d1mb4a1, d1mb4b1
    complexed with cys, ndp
2. Domain for 1mc4:
  - Domain d1mc4a2: 1mc4 A:133-354 [84928]
    Other proteins in same PDB: d1mc4a1
3. Domains for 3pzr:
  1. Domain d3pzra2: 3pzr A:133-354 [214993]
    Other proteins in same PDB: d3pzra1, d3pzrb1
    automated match to d1mb4a2
    complexed with cys, na, nap
  2. Domain d3pzrb2: 3pzr B:133-354 [214995]
    Other proteins in same PDB: d3pzra1, d3pzrb1
    automated match to d1mb4a2
    complexed with cys, na, nap
4. Domains for 3q0e:
  1. Domain d3q0ea2: 3q0e A:133-354 [215008]
    Other proteins in same PDB: d3q0ea1, d3q0eb1
    automated match to d1mb4a2
    complexed with act, cys, edo, so4
  2. Domain d3q0eb2: 3q0e B:133-354 [215010]
    Other proteins in same PDB: d3q0ea1, d3q0eb1
    automated match to d1mb4a2
    complexed with act, cys, edo, so4

More info for Protein Aspartate beta-semialdehyde dehydrogenase from d.81.1.1: GAPDH-like

Timeline for Protein Aspartate beta-semialdehyde dehydrogenase from d.81.1.1: GAPDH-like:

Protein Aspartate beta-semialdehyde dehydrogenase from d.81.1.1: GAPDH-like first appeared (with stable ids) in SCOP 1.55
Protein Aspartate beta-semialdehyde dehydrogenase from d.81.1.1: GAPDH-like appears in SCOPe 2.03
Protein Aspartate beta-semialdehyde dehydrogenase from d.81.1.1: GAPDH-like appears in SCOPe 2.05
Protein Aspartate beta-semialdehyde dehydrogenase from d.81.1.1: GAPDH-like appears in the current release, SCOPe 2.08