SCOP 1.67: Family d.81.1.1: GAPDH-like

Lineage for Family d.81.1.1: GAPDH-like

1. Root: SCOP 1.67

2. Class d: Alpha and beta proteins (a+b) [53931] (260 folds)

3. Fold d.81: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55346] (1 superfamily)
   core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1

4. Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families)
   N-terminal domain is the classic Rossmann-fold

5. Family d.81.1.1: GAPDH-like [55348] (3 proteins)
   has many additional secondary structures

Proteins:

1. Acetaldehyde dehydrogenase (acylating) [89988] (1 species)

   • Species Pseudomonas sp. [TaxId:306] [89989] (1 PDB entry)

2. Aspartate beta-semialdehyde dehydrogenase [55361] (3 species)

   1. Species Escherichia coli [TaxId:562] [55362] (2 PDB entries)

   2. Species Haemophilus influenzae [TaxId:727] [103103] (3 PDB entries)

   3. Species Vibrio cholerae [TaxId:666] [82725] (2 PDB entries)

3. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349] (16 species)

   1. Species Achromobacter xylosoxidans [TaxId:85698] [89987] (1 PDB entry)
      formerly Alcaligenes xylosoxidans

   2. Species Archaeon Methanothermus fervidus [TaxId:2180] [55355] (1 PDB entry)

   3. Species Archaeon Sulfolobus solfataricus [TaxId:2287] [55354] (1 PDB entry)

   4. Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] [55351] (10 PDB entries)

   5. Species Escherichia coli [TaxId:562] [55350] (6 PDB entries)

   6. Species Human (Homo sapiens) [TaxId:9606] [55360] (1 PDB entry)

   7. Species Leishmania mexicana [TaxId:5665] [55357] (5 PDB entries)

   8. Species Lobster (Homarus americanus) [55358] (2 PDB entries)

   9. Species Lobster (Palinurus versicolor) [55359] (5 PDB entries)

   10. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [103102] (1 PDB entry)

   11. Species Spinach (Spinacia oleracea) [TaxId:3562] [69769] (2 PDB entries)

   12. Species Thermotoga maritima [TaxId:243274] [55353] (1 PDB entry)

   13. Species Thermus aquaticus [TaxId:271] [55352] (1 PDB entry)

   14. Species Thermus thermophilus [TaxId:274] [103101] (1 PDB entry)

   15. Species Trypanosoma brucei brucei, glycosome [TaxId:5702] [55356] (1 PDB entry)

   16. Species Trypanosoma cruzi [TaxId:5693] [75483] (3 PDB entries)

More info for Family d.81.1.1: GAPDH-like

Timeline for Family d.81.1.1: GAPDH-like:

• Family d.81.1.1: GAPDH-like first appeared (with stable ids) in SCOP 1.55
  
• Family d.81.1.1: GAPDH-like appears in SCOP 1.65
  
• Family d.81.1.1: GAPDH-like appears in SCOP 1.69
  
• Family d.81.1.1: GAPDH-like appears in the current release, SCOPe 2.08