SCOPe 2.07: Family d.79.4.1: PurM N-terminal domain-like

Lineage for Family d.79.4.1: PurM N-terminal domain-like

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.4: PurM N-terminal domain-like [55326] (2 families)

5. Family d.79.4.1: PurM N-terminal domain-like [55327] (7 proteins)

Proteins:

1. Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain [55328] (3 species)

   1. Species Escherichia coli [TaxId:562] [55329] (1 PDB entry)

   2. Species Francisella tularensis [TaxId:177416] [225918] (1 PDB entry)

   3. Species Thermus thermophilus HB8 [TaxId:300852] [346369] (1 PDB entry)

2. FGAM synthase PurL, PurM-like module, N1 and N2 domains [111035] (3 species)

   1. Species Salmonella enterica [TaxId:90371] [227351] (2 PDB entries)

   2. Species Salmonella typhimurium [TaxId:90371] [111036] (1 PDB entry)
      Uniprot P74881

   3. Species Salmonella typhimurium [TaxId:99287] [229690] (1 PDB entry)

3. Hydrogenase expression/formation protein HypE [160513] (1 species)

   • Species Thermococcus kodakaraensis [TaxId:311400] [160514] (3 PDB entries)
     Uniprot Q5JII7 41-155

4. Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 [103082] (1 species)
   duplication: tandem repeats of two PurM-like units arranged like the PurM subunits in the dimer

   • Species Thermotoga maritima [TaxId:2336] [103083] (7 PDB entries)
     TM1246

5. Selenide, water dikinase SelD [160511] (1 species)

   • Species Aquifex aeolicus [TaxId:63363] [160512] (4 PDB entries)
     Uniprot O67139 1-154! Uniprot O67139 28-154

6. Thiamine monophosphate kinase (ThiL) N-terminal domain [118030] (1 species)

   • Species Aquifex aeolicus [TaxId:63363] [118031] (5 PDB entries)
     Uniprot O67883

7. automated matches [227043] (2 species)
   not a true protein

   1. Species Aquifex aeolicus [311194] (1 PDB entry)

   2. Species Vibrio cholerae [TaxId:666] [225998] (1 PDB entry)

More info for Family d.79.4.1: PurM N-terminal domain-like

Timeline for Family d.79.4.1: PurM N-terminal domain-like:

• Family d.79.4.1: PurM N-terminal domain-like first appeared (with stable ids) in SCOP 1.55, called Family d.79.4.1: Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain
  
• Family d.79.4.1: PurM N-terminal domain-like appears in SCOPe 2.06
  
• Family d.79.4.1: PurM N-terminal domain-like appears in the current release, SCOPe 2.08