Lineage for Protein: Eukaryotic RPB5 C-terminal domain

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2525034Fold d.78: RPB5-like RNA polymerase subunit [55286] (1 superfamily)
    core: beta-alpha-beta-alpha-beta(2); 2 layers, alpha/beta
  4. 2525035Superfamily d.78.1: RPB5-like RNA polymerase subunit [55287] (2 families) (S)
    automatically mapped to Pfam PF01191
  5. 2525036Family d.78.1.1: RPB5 [55288] (2 proteins)
  6. 2525037Protein Eukaryotic RPB5 C-terminal domain [55292] (2 species)

Species:

  1. 2525038Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55293] (27 PDB entries)
    Uniprot P20434; part of multichain biological unit
    1. Domain for 1dzf:
    2. Domain for 1i3q:
    3. Domain for 1i50:
    4. Domain for 1i6h:
    5. Domain for 1k83:
    6. Domain for 1twa:
    7. Domain for 1twc:
    8. Domain for 1twf:
    9. Domain for 1twg:
    10. Domain for 1twh:
    11. Domain for 2b63:
    12. Domain for 2b8k:
    13. Domain for 2e2h:
    14. Domain for 2e2i:
    15. Domain for 2e2j:
    16. Domain for 2ja5:
    17. Domain for 2ja6:
    18. Domains for 2ja7:
      1. 2525061Domain d2ja7e2: 2ja7 E:144-215 [138196]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
        automatically matched to d1dzfa2
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
      2. 2525062Domain d2ja7q2: 2ja7 Q:144-215 [138212]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
        automatically matched to d1dzfa2
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
    19. Domain for 2ja8:
    20. Domain for 2nvq:
    21. Domain for 2nvt:
    22. Domain for 2nvx:
    23. Domain for 2nvy:
    24. Domain for 2nvz:
    25. Domain for 2yu9:
    26. Domains for 4c2m:
      1. 2525046Domain d4c2me2: 4c2m E:144-215 [228424]
        Other proteins in same PDB: d4c2m1_, d4c2m2_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mj_, d4c2mk_, d4c2ml_, d4c2mm_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2my_, d4c2mz_
        automated match to d1twfe2
        complexed with so4, zn
      2. 2525047Domain d4c2mt2: 4c2m T:144-215 [228431]
        Other proteins in same PDB: d4c2m1_, d4c2m2_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mj_, d4c2mk_, d4c2ml_, d4c2mm_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2my_, d4c2mz_
        automated match to d1twfe2
        complexed with so4, zn
    27. Domain for 4c3h:
  2. 2525068Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [224935] (1 PDB entry)

More info for Protein Eukaryotic RPB5 C-terminal domain from d.78.1.1: RPB5

Timeline for Protein Eukaryotic RPB5 C-terminal domain from d.78.1.1: RPB5: