SCOP 1.65: Protein: RNA polymerase alpha

Lineage for Protein: RNA polymerase alpha

Root: SCOP 1.65
Class d: Alpha and beta proteins (a+b) [53931] (234 folds)
Fold d.74: DCoH-like [55247] (5 superfamilies)
beta(2)-alpha-beta(2)-alpha; 2 layers, alpha/beta
Superfamily d.74.3: RBP11-like subunits of RNA polymerase [55257] (2 families)
form homo and heterodimers
Family d.74.3.1: RNA polymerase alpha subunit dimerisation domain [55258] (2 proteins)
Protein RNA polymerase alpha [55259] (3 species)

Species:

Escherichia coli [TaxId:562] [55260] (1 PDB entry)
- Domains for 1bdf:
  1. Domain d1bdfa1: 1bdf A:2-52,A:179-232 [39727]
    Other proteins in same PDB: d1bdfa2, d1bdfb2, d1bdfc2, d1bdfd2
  2. Domain d1bdfb1: 1bdf B:1-52,B:179-235 [39728]
    Other proteins in same PDB: d1bdfa2, d1bdfb2, d1bdfc2, d1bdfd2
  3. Domain d1bdfc1: 1bdf C:1-52,C:179-235 [39729]
    Other proteins in same PDB: d1bdfa2, d1bdfb2, d1bdfc2, d1bdfd2
  4. Domain d1bdfd1: 1bdf D:1-52,D:179-235 [39730]
    Other proteins in same PDB: d1bdfa2, d1bdfb2, d1bdfc2, d1bdfd2
    mutant
Thermus aquaticus [TaxId:271] [64314] (1 PDB entry)
- Domains for 1i6v:
  1. Domain d1i6va1: 1i6v A:6-49,A:173-229 [61852]
    Other proteins in same PDB: d1i6va2, d1i6vb2, d1i6vc_, d1i6vd_, d1i6ve_
  2. Domain d1i6vb1: 1i6v B:3-49,B:173-232 [61854]
    Other proteins in same PDB: d1i6va2, d1i6vb2, d1i6vc_, d1i6vd_, d1i6ve_
    complexed with mg, rfp, zn

Thermus thermophilus [TaxId:274] [75478] (1 PDB entry)

Domains for 1iw7:

Domain d1iw7a1: 1iw7 A:1-49,A:173-229 [71470]
Other proteins in same PDB: d1iw7a2, d1iw7b2, d1iw7c_, d1iw7d_, d1iw7e_, d1iw7f1, d1iw7f2, d1iw7f3, d1iw7k2, d1iw7l2, d1iw7m_, d1iw7n_, d1iw7o_, d1iw7p1, d1iw7p2, d1iw7p3

Domain d1iw7b1: 1iw7 B:1-49,B:173-229 [71472]
Other proteins in same PDB: d1iw7a2, d1iw7b2, d1iw7c_, d1iw7d_, d1iw7e_, d1iw7f1, d1iw7f2, d1iw7f3, d1iw7k2, d1iw7l2, d1iw7m_, d1iw7n_, d1iw7o_, d1iw7p1, d1iw7p2, d1iw7p3

Domain d1iw7k1: 1iw7 K:1-49,K:173-229 [71478]
Other proteins in same PDB: d1iw7a2, d1iw7b2, d1iw7c_, d1iw7d_, d1iw7e_, d1iw7f1, d1iw7f2, d1iw7f3, d1iw7k2, d1iw7l2, d1iw7m_, d1iw7n_, d1iw7o_, d1iw7p1, d1iw7p2, d1iw7p3

Domain d1iw7l1: 1iw7 L:1-49,L:173-229 [71480]
Other proteins in same PDB: d1iw7a2, d1iw7b2, d1iw7c_, d1iw7d_, d1iw7e_, d1iw7f1, d1iw7f2, d1iw7f3, d1iw7k2, d1iw7l2, d1iw7m_, d1iw7n_, d1iw7o_, d1iw7p1, d1iw7p2, d1iw7p3
complexed with mg, pb

More info for Protein RNA polymerase alpha from d.74.3.1: RNA polymerase alpha subunit dimerisation domain

Timeline for Protein RNA polymerase alpha from d.74.3.1: RNA polymerase alpha subunit dimerisation domain:

Protein RNA polymerase alpha from d.74.3.1: RNA polymerase alpha subunit dimerisation domain first appeared (with stable ids) in SCOP 1.55, called Protein Dimerization subdomain of RNA polymerase alpha subunit N-terminal domain from d.74.3.1: Dimerization subdomain of RNA polymerase alpha subunit N-terminal domain
Protein RNA polymerase alpha from d.74.3.1: RNA polymerase alpha subunit dimerisation domain appears in SCOP 1.63
Protein RNA polymerase alpha from d.74.3.1: RNA polymerase alpha subunit dimerisation domain appears in SCOP 1.67
Protein RNA polymerase alpha from d.74.3.1: RNA polymerase alpha subunit dimerisation domain appears in the current release, SCOPe 2.08