SCOPe 2.05: Protein: Methyl-coenzyme M reductase gamma chain

Lineage for Protein: Methyl-coenzyme M reductase gamma chain

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

Superfamily d.58.31: Methyl-coenzyme M reductase subunits [55088] (3 families)

each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures

Family d.58.31.1: Methyl-coenzyme M reductase gamma chain [55089] (1 protein)
automatically mapped to Pfam PF02240
Protein Methyl-coenzyme M reductase gamma chain [55090] (3 species)

Species:

Methanobacterium thermoautotrophicum [TaxId:145262] [55091] (12 PDB entries)

Domains for 1hbm:
1. Domain d1hbmc_: 1hbm C: [60892]
  Other proteins in same PDB: d1hbma1, d1hbma2, d1hbmb1, d1hbmb2, d1hbmd1, d1hbmd2, d1hbme1, d1hbme2
  complexed with cl, f43, gol, mg, na, sht, zn
2. Domain d1hbmf_: 1hbm F: [60897]
  Other proteins in same PDB: d1hbma1, d1hbma2, d1hbmb1, d1hbmb2, d1hbmd1, d1hbmd2, d1hbme1, d1hbme2
  complexed with cl, f43, gol, mg, na, sht, zn
Domains for 1hbn:
1. Domain d1hbnc_: 1hbn C: [60902]
  Other proteins in same PDB: d1hbna1, d1hbna2, d1hbnb1, d1hbnb2, d1hbnd1, d1hbnd2, d1hbne1, d1hbne2
  complexed with cl, com, f43, gol, mg, na, tp7, zn
2. Domain d1hbnf_: 1hbn F: [60907]
  Other proteins in same PDB: d1hbna1, d1hbna2, d1hbnb1, d1hbnb2, d1hbnd1, d1hbnd2, d1hbne1, d1hbne2
  complexed with cl, com, f43, gol, mg, na, tp7, zn
Domains for 1hbo:
1. Domain d1hboc_: 1hbo C: [60912]
  Other proteins in same PDB: d1hboa1, d1hboa2, d1hbob1, d1hbob2, d1hbod1, d1hbod2, d1hboe1, d1hboe2
  complexed with cl, com, f43, gol, mg, na, tp7, zn
2. Domain d1hbof_: 1hbo F: [60917]
  Other proteins in same PDB: d1hboa1, d1hboa2, d1hbob1, d1hbob2, d1hbod1, d1hbod2, d1hboe1, d1hboe2
  complexed with cl, com, f43, gol, mg, na, tp7, zn
Domains for 1hbu:
1. Domain d1hbuc_: 1hbu C: [60922]
  Other proteins in same PDB: d1hbua1, d1hbua2, d1hbub1, d1hbub2, d1hbud1, d1hbud2, d1hbue1, d1hbue2
  complexed with cl, com, f43, gol, mg, na, tp7, zn
2. Domain d1hbuf_: 1hbu F: [60927]
  Other proteins in same PDB: d1hbua1, d1hbua2, d1hbub1, d1hbub2, d1hbud1, d1hbud2, d1hbue1, d1hbue2
  complexed with cl, com, f43, gol, mg, na, tp7, zn
Domains for 1mro:
1. Domain d1mroc_: 1mro C: [39437]
  Other proteins in same PDB: d1mroa1, d1mroa2, d1mrob1, d1mrob2, d1mrod1, d1mrod2, d1mroe1, d1mroe2
  complexed with com, f43, gol, na, tp7, zn
2. Domain d1mrof_: 1mro F: [39438]
  Other proteins in same PDB: d1mroa1, d1mroa2, d1mrob1, d1mrob2, d1mrod1, d1mrod2, d1mroe1, d1mroe2
  complexed with com, f43, gol, na, tp7, zn

Domains for 3m1v:

Domain d3m1vc_: 3m1v C: [180722]
Other proteins in same PDB: d3m1va1, d3m1va2, d3m1vb1, d3m1vb2, d3m1vd1, d3m1vd2, d3m1ve1, d3m1ve2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, tp7, zn

Domain d3m1vf_: 3m1v F: [180723]
Other proteins in same PDB: d3m1va1, d3m1va2, d3m1vb1, d3m1vb2, d3m1vd1, d3m1vd2, d3m1ve1, d3m1ve2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, tp7, zn

Domains for 3m2r:

Domain d3m2rc_: 3m2r C: [180763]
Other proteins in same PDB: d3m2ra1, d3m2ra2, d3m2rb1, d3m2rb2, d3m2rd1, d3m2rd2, d3m2re1, d3m2re2
automated match to d1hbmc_
complexed with com, edo, f43, mg, peg, tp7, tpz, zn

Domain d3m2rf_: 3m2r F: [180764]
Other proteins in same PDB: d3m2ra1, d3m2ra2, d3m2rb1, d3m2rb2, d3m2rd1, d3m2rd2, d3m2re1, d3m2re2
automated match to d1hbmc_
complexed with com, edo, f43, mg, peg, tp7, tpz, zn

Domains for 3m2u:

Domain d3m2uc_: 3m2u C: [180765]
Other proteins in same PDB: d3m2ua1, d3m2ua2, d3m2ub1, d3m2ub2, d3m2ud1, d3m2ud2, d3m2ue1, d3m2ue2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, tp7, txz, zn

Domain d3m2uf_: 3m2u F: [180766]
Other proteins in same PDB: d3m2ua1, d3m2ua2, d3m2ub1, d3m2ub2, d3m2ud1, d3m2ud2, d3m2ue1, d3m2ue2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, tp7, txz, zn

Domains for 3m2v:

Domain d3m2vc_: 3m2v C: [180767]
Other proteins in same PDB: d3m2va1, d3m2va2, d3m2vb1, d3m2vb2, d3m2vd1, d3m2vd2, d3m2ve1, d3m2ve2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, tp7, xp8, zn

Domain d3m2vf_: 3m2v F: [180768]
Other proteins in same PDB: d3m2va1, d3m2va2, d3m2vb1, d3m2vb2, d3m2vd1, d3m2vd2, d3m2ve1, d3m2ve2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, tp7, xp8, zn

Domains for 3m30:

Domain d3m30c_: 3m30 C: [180772]
Other proteins in same PDB: d3m30a1, d3m30a2, d3m30b1, d3m30b2, d3m30d1, d3m30d2, d3m30e1, d3m30e2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, tp7, xp9, zn

Domain d3m30f_: 3m30 F: [180773]
Other proteins in same PDB: d3m30a1, d3m30a2, d3m30b1, d3m30b2, d3m30d1, d3m30d2, d3m30e1, d3m30e2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, tp7, xp9, zn

Domains for 3m32:

Domain d3m32c_: 3m32 C: [180775]
Other proteins in same PDB: d3m32a1, d3m32a2, d3m32b1, d3m32b2, d3m32d1, d3m32d2, d3m32e1, d3m32e2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, sht, tp7, zn

Domain d3m32f_: 3m32 F: [180776]
Other proteins in same PDB: d3m32a1, d3m32a2, d3m32b1, d3m32b2, d3m32d1, d3m32d2, d3m32e1, d3m32e2
automated match to d1hbmc_
complexed with act, com, edo, f43, mg, peg, sht, tp7, zn

Domains for 3pot:

Domain d3potc_: 3pot C: [183913]
Other proteins in same PDB: d3pota1, d3pota2, d3potb1, d3potb2, d3potd1, d3potd2, d3pote1, d3pote2
automated match to d1hbmc_
complexed with 06c, com, edo, f43, k, mg, tp7, txz

Domain d3potf_: 3pot F: [183914]
Other proteins in same PDB: d3pota1, d3pota2, d3potb1, d3potb2, d3potd1, d3potd2, d3pote1, d3pote2
automated match to d1hbmc_
complexed with 06c, com, edo, f43, k, mg, tp7, txz

Methanopyrus kandleri [TaxId:2320] [55092] (1 PDB entry)
- Domains for 1e6v:
  1. Domain d1e6vc_: 1e6v C: [39439]
    Other proteins in same PDB: d1e6va1, d1e6va2, d1e6vb1, d1e6vb2, d1e6vd1, d1e6vd2, d1e6ve1, d1e6ve2
    complexed with com, f43, tp7
  2. Domain d1e6vf_: 1e6v F: [39440]
    Other proteins in same PDB: d1e6va1, d1e6va2, d1e6vb1, d1e6vb2, d1e6vd1, d1e6vd2, d1e6ve1, d1e6ve2
    complexed with com, f43, tp7
Methanosarcina barkeri [TaxId:2208] [55093] (1 PDB entry)
- Domains for 1e6y:
  1. Domain d1e6yc_: 1e6y C: [39441]
    Other proteins in same PDB: d1e6ya1, d1e6ya2, d1e6yb1, d1e6yb2, d1e6yd1, d1e6yd2, d1e6ye1, d1e6ye2
    complexed with com, f43, gol, tp7
  2. Domain d1e6yf_: 1e6y F: [39442]
    Other proteins in same PDB: d1e6ya1, d1e6ya2, d1e6yb1, d1e6yb2, d1e6yd1, d1e6yd2, d1e6ye1, d1e6ye2
    complexed with com, f43, gol, tp7

More info for Protein Methyl-coenzyme M reductase gamma chain from d.58.31.1: Methyl-coenzyme M reductase gamma chain

Timeline for Protein Methyl-coenzyme M reductase gamma chain from d.58.31.1: Methyl-coenzyme M reductase gamma chain:

Protein Methyl-coenzyme M reductase gamma chain from d.58.31.1: Methyl-coenzyme M reductase gamma chain first appeared (with stable ids) in SCOP 1.55
Protein Methyl-coenzyme M reductase gamma chain from d.58.31.1: Methyl-coenzyme M reductase gamma chain appears in SCOPe 2.04
Protein Methyl-coenzyme M reductase gamma chain from d.58.31.1: Methyl-coenzyme M reductase gamma chain appears in SCOPe 2.06
Protein Methyl-coenzyme M reductase gamma chain from d.58.31.1: Methyl-coenzyme M reductase gamma chain appears in the current release, SCOPe 2.08