Lineage for Protein: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily d.58.30: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK [55083] (1 family) (S)
    common fold is elaborated with additional secondary structures
    automatically mapped to Pfam PF01288
  5. Family d.58.30.1: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK [55084] (1 protein)
  6. Protein 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK [55085] (4 species)

Species:

  1. Escherichia coli K-12 [TaxId:83333] [189336] (12 PDB entries)
    1. Domain for 3h4a:
    2. Domain for 3hcx:
    3. Domain for 3hd1:
    4. Domain for 3hd2:
    5. Domain for 4m5g:
    6. Domain for 4m5h:
    7. Domain for 4m5i:
    8. Domain for 4m5j:
    9. Domain for 4m5k:
    10. Domain for 4m5l:
    11. Domain for 4m5m:
    12. Domains for 4m5n:
      1. Domain d4m5na1: 4m5n A:0-158 [266717]
        Other proteins in same PDB: d4m5na2, d4m5nb2
        automated match to d4m5ha_
        complexed with apc, mg, yh7
      2. Domain d4m5nb1: 4m5n B:0-158 [266718]
        Other proteins in same PDB: d4m5na2, d4m5nb2
        automated match to d4m5ha_
        complexed with apc, mg, yh7
  2. Escherichia coli [TaxId:562] [55086] (49 PDB entries)
    Uniprot P26281
    1. Domain for 1dy3:
    2. Domain for 1eq0:
    3. Domain for 1eqm:
    4. Domain for 1eqo:
    5. Domain for 1ex8:
    6. Domain for 1f9h:
    7. Domain for 1f9y:
    8. Domains for 1g4c:
      1. Domain d1g4ca_: 1g4c A: [83270]
        complexed with cl, mg
      2. Domain d1g4cb_: 1g4c B: [83271]
        complexed with cl, mg
    9. Domain for 1hka:
    10. Domain for 1hq2:
    11. Domain for 1im6:
    12. Domain for 1kbr:
    13. Domain for 1q0n:
    14. Domain for 1rao:
    15. Domain for 1rb0:
    16. Domain for 1rtz:
    17. Domains for 1ru1:
      1. Domain d1ru1a_: 1ru1 A: [97832]
        complexed with apc, cl, mg, ph2
      2. Domain d1ru1b_: 1ru1 B: [97833]
        complexed with apc, cl, mg, ph2
    18. Domain for 1ru2:
    19. Domain for 1tmj:
    20. Domains for 1tmm:
      1. Domain d1tmma_: 1tmm A: [161776]
        automated match to d1dy3a_
        complexed with act, apc, cl, gol, hhr, mg
      2. Domain d1tmmb_: 1tmm B: [161777]
        automated match to d1dy3a_
        complexed with act, apc, cl, gol, hhr, mg
    21. Domain for 2f63:
    22. Domain for 2f65:
    23. Domains for 3hsd:
      1. Domain d3hsda_: 3hsd A: [177806]
        automated match to d1dy3a_
        complexed with cl, gol, mg
      2. Domain d3hsdb_: 3hsd B: [177807]
        automated match to d1dy3a_
        complexed with cl, gol, mg
    24. Domain for 3hsg:
    25. Domain for 3hsj:
    26. Domain for 3hsz:
    27. Domain for 3ht0:
    28. Domain for 3ili:
    29. Domain for 3ilj:
    30. Domain for 3ill:
    31. Domain for 3ilo:
    32. Domain for 3ip0:
    33. Domain for 3kue:
    34. Domain for 3kug:
    35. Domain for 3kuh:
    36. Domain for 3ud5:
    37. Domain for 3ude:
    38. Domain for 3udv:
    39. Domain for 4f7v:
    40. Domain for 5etk:
    41. Domains for 5etl:
      1. Domain d5etla1: 5etl A:0-158 [316933]
        Other proteins in same PDB: d5etla2, d5etlb2, d5etlc2, d5etld2
        automated match to d4m5ia_
        complexed with 5rv, atp, ca
      2. Domain d5etlb1: 5etl B:0-158 [316972]
        Other proteins in same PDB: d5etla2, d5etlb2, d5etlc2, d5etld2
        automated match to d4m5ia_
        complexed with 5rv, atp, ca
      3. Domain d5etlc1: 5etl C:0-158 [316985]
        Other proteins in same PDB: d5etla2, d5etlb2, d5etlc2, d5etld2
        automated match to d4m5ia_
        complexed with 5rv, atp, ca
      4. Domain d5etld1: 5etl D:0-158 [316949]
        Other proteins in same PDB: d5etla2, d5etlb2, d5etlc2, d5etld2
        automated match to d4m5ia_
        complexed with 5rv, atp, ca
    42. Domain for 5etm:
    43. Domain for 5etn:
    44. Domain for 5eto:
    45. Domain for 5etp:
    46. Domain for 6an4:
    47. Domains for 6an6:
      1. Domain d6an6a_: 6an6 A: [356005]
        automated match to d1q0na_
        complexed with j1i
      2. Domain d6an6b_: 6an6 B: [355978]
        automated match to d1q0na_
        complexed with j1i
    48. Domain for 7kdo:
    49. Domain for 7kdr:
  3. Haemophilus influenzae [TaxId:727] [55087] (1 PDB entry)
  4. Yersinia pestis [TaxId:632] [188233] (1 PDB entry)

More info for Protein 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK from d.58.30.1: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK

Timeline for Protein 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK from d.58.30.1: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK:

  • Protein 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK from d.58.30.1: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK first appeared (with stable ids) in SCOP 1.55
  • Protein 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK from d.58.30.1: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK appears in SCOPe 2.07