SCOPe 2.08: Family d.58.19.1: Bacterial exopeptidase dimerisation domain

Lineage for Family d.58.19.1: Bacterial exopeptidase dimerisation domain

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.19: Bacterial exopeptidase dimerisation domain [55031] (1 family)

5. Family d.58.19.1: Bacterial exopeptidase dimerisation domain [55032] (8 proteins)

Proteins:

1. Allantoate amidohydrolase AllC [143401] (1 species)

   • Species Escherichia coli [TaxId:562] [143402] (2 PDB entries)
     Uniprot P77425 211-327

2. Aminopeptidase PepV [82685] (1 species)
   contains insert sudbomain 205-292 mimicking the other half of the family-specific dimer

   • Species Lactobacillus delbrueckii [TaxId:1584] [82686] (1 PDB entry)

3. Carboxypeptidase G2 [55033] (1 species)
   dimerisation mode is similar to that of 1PSD domain

   • Species Pseudomonas sp., strain rs-16 [TaxId:306] [55034] (1 PDB entry)

4. IAA-amino acid hydrolase [117979] (1 species)
   apparently monomeric

   • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [117980] (2 PDB entries)
     Uniprot P54970 37-428

5. Peptidase T (tripeptidase) [75443] (2 species)

   1. Species Escherichia coli [TaxId:562] [103002] (1 PDB entry)

   2. Species Salmonella typhimurium [TaxId:90371] [75444] (1 PDB entry)

6. Peptidase-like beta-alanine synthase [103003] (1 species)

   • Species Yeast (Saccharomyces kluyveri) [TaxId:4934] [103004] (2 PDB entries)

7. Protein YxeP [143403] (1 species)
   dimeric protein closely related to IAA-amino acid hydrolase

   • Species Bacillus subtilis [TaxId:1423] [143404] (1 PDB entry)
     Uniprot P54955 178-292

8. Succinyl-diaminopimelate desuccinylase [103005] (1 species)

   • Species Neisseria meningitidis [TaxId:487] [103006] (1 PDB entry)

More info for Family d.58.19.1: Bacterial exopeptidase dimerisation domain

Timeline for Family d.58.19.1: Bacterial exopeptidase dimerisation domain:

• Family d.58.19.1: Bacterial exopeptidase dimerisation domain first appeared (with stable ids) in SCOP 1.55, called Family d.58.19.1: Carboxypeptidase G2, dimerisation domain
  
• Family d.58.19.1: Bacterial exopeptidase dimerisation domain appears in SCOPe 2.07