SCOPe 2.04: Family d.58.17.1: HMA, heavy metal-associated domain

Lineage for Family d.58.17.1: HMA, heavy metal-associated domain

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.17: HMA, heavy metal-associated domain [55008] (2 families)

5. Family d.58.17.1: HMA, heavy metal-associated domain [55009] (9 proteins)

Proteins:

1. ATX1 metallochaperone protein (ATOX1) [55014] (2 species)

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55015] (6 PDB entries)

   2. Species Human (Homo sapiens), HAH1 [TaxId:9606] [55016] (10 PDB entries)
      Uniprot O00244

2. Copper chaperone [55017] (3 species)

   1. Species Bacillus subtilis, CopZ [TaxId:1423] [69736] (2 PDB entries)

   2. Species Enterococcus hirae [TaxId:1354] [55018] (1 PDB entry)

   3. Species Synechocystis sp. PCC 6803, Scatx1 [TaxId:1148] [102998] (6 PDB entries)

3. Copper chaperone for superoxide dismutase, N-terminal domain [55019] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55020] (2 PDB entries)

4. Copper transporter domain ccc2a [64279] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64280] (3 PDB entries)

5. Menkes copper-transporting ATPase [55012] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [55013] (7 PDB entries)

6. Mercuric ion binding protein MerP [55010] (2 species)

   1. Species Ralstonia metallidurans CH34 [TaxId:266264] [110979] (1 PDB entry)
      Uniprot O66016 Q58AI1 Q5NUU9 Q6UP70 Q7BRH5 Q7BRH6 Q7X3A5 # 100% identity

   2. Species Shigella flexneri [TaxId:623] [55011] (3 PDB entries)

7. Metal ion-transporting ATPase ZntA, N-terminal domain [82683] (1 species)

   • Species Escherichia coli [TaxId:562] [82684] (2 PDB entries)

8. Potential copper-translocating P-type ATPase CopA (YvgX) [75441] (1 species)
   duplication: contains tandem repeat of two HMA domains in the N-terminal region

   • Species Bacillus subtilis [TaxId:1423] [75442] (6 PDB entries)

9. automated matches [190409] (4 species)
   not a true protein

   1. Species Bacillus subtilis [TaxId:1423] [189117] (3 PDB entries)

   2. Species Human (Homo sapiens) [TaxId:9606] [188690] (4 PDB entries)

   3. Species Synechocystis sp. PCC 6803 [TaxId:1148] [189440] (2 PDB entries)

   4. Species Synechocystis sp. [TaxId:1148] [194236] (1 PDB entry)

More info for Family d.58.17.1: HMA, heavy metal-associated domain

Timeline for Family d.58.17.1: HMA, heavy metal-associated domain:

• Family d.58.17.1: HMA, heavy metal-associated domain first appeared (with stable ids) in SCOP 1.55, called Family d.58.17.1: Metal-binding domain
  
• Family d.58.17.1: HMA, heavy metal-associated domain appears in SCOPe 2.03
  
• Family d.58.17.1: HMA, heavy metal-associated domain appears in SCOPe 2.05
  
• Family d.58.17.1: HMA, heavy metal-associated domain appears in the current release, SCOPe 2.08