Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.58: Ferredoxin-like [54861] (62 superfamilies) alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 |
Superfamily d.58.8: Viral DNA-binding domain [54957] (1 family) |
Family d.58.8.1: Viral DNA-binding domain [54958] (3 proteins) |
Protein Epstein barr virus nuclear antigen-1 (ebna1) [54964] (2 species) DNA-binding mode differs from that of E2 protein |
Epstein-barr virus (strain b95-8) [TaxId:10377] [385181] (5 PDB entries) |
Domain d5wmfa_: 5wmf A: [337644] automated match to d1b3ta_ has additional insertions and/or extensions that are not grouped together |
Domain d5wmfb_: 5wmf B: [337709] automated match to d1b3ta_ has additional insertions and/or extensions that are not grouped together |
Domain d5wmfc_: 5wmf C: [337690] automated match to d1b3ta_ has additional insertions and/or extensions that are not grouped together |
Domain d5wmfd_: 5wmf D: [337646] automated match to d1b3ta_ has additional insertions and/or extensions that are not grouped together |
Domain d5wmfe_: 5wmf E: [337648] automated match to d1b3ta_ has additional insertions and/or extensions that are not grouped together |
Domain d5wmff_: 5wmf F: [337750] automated match to d1b3ta_ has additional insertions and/or extensions that are not grouped together |
Domain d6npia1: 6npi A:471-607 [366616] Other proteins in same PDB: d6npia2 automated match to d1b3ta_ protein/DNA complex; complexed with 60q, kw1 has additional insertions and/or extensions that are not grouped together |
Domain d6npib_: 6npi B: [366611] Other proteins in same PDB: d6npia2 automated match to d1b3ta_ protein/DNA complex; complexed with 60q, kw1 has additional insertions and/or extensions that are not grouped together |
Domain d6npma1: 6npm A:471-607 [366607] Other proteins in same PDB: d6npma2 automated match to d1b3ta_ protein/DNA complex; complexed with kvd has additional insertions and/or extensions that are not grouped together |
Domain d6npmb_: 6npm B: [366655] Other proteins in same PDB: d6npma2 automated match to d1b3ta_ protein/DNA complex; complexed with kvd has additional insertions and/or extensions that are not grouped together |
Domain d6nppa1: 6npp A:471-607 [366600] Other proteins in same PDB: d6nppa2, d6nppb_ automated match to d1b3ta_ protein/DNA complex; complexed with kwg has additional insertions and/or extensions that are not grouped together |
Domain d6vh6a1: 6vh6 A:470-607 [385182] Other proteins in same PDB: d6vh6a2 automated match to d1vhia_ protein/DNA complex; complexed with qx4 has additional insertions and/or extensions that are not grouped together |
Domain d6vh6b_: 6vh6 B: [385204] Other proteins in same PDB: d6vh6a2 automated match to d1vhia_ protein/DNA complex; complexed with qx4 has additional insertions and/or extensions that are not grouped together |
Epstein-Barr virus [TaxId:10376] [54965] (2 PDB entries) |
Domain d1b3ta_: 1b3t A: [39228] protein/DNA complex has additional insertions and/or extensions that are not grouped together |
Domain d1b3tb_: 1b3t B: [39229] protein/DNA complex has additional insertions and/or extensions that are not grouped together |
Domain d1vhia_: 1vhi A: [39230] has additional insertions and/or extensions that are not grouped together |
Domain d1vhib_: 1vhi B: [39231] has additional insertions and/or extensions that are not grouped together |
Timeline for Protein Epstein barr virus nuclear antigen-1 (ebna1) from d.58.8.1: Viral DNA-binding domain: