Lineage for Protein: Epstein barr virus nuclear antigen-1 (ebna1)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2952704Superfamily d.58.8: Viral DNA-binding domain [54957] (1 family) (S)
  5. 2952705Family d.58.8.1: Viral DNA-binding domain [54958] (3 proteins)
  6. 2952706Protein Epstein barr virus nuclear antigen-1 (ebna1) [54964] (2 species)
    DNA-binding mode differs from that of E2 protein

Species:

  1. 2952707Epstein-barr virus (strain b95-8) [TaxId:10377] [385181] (5 PDB entries)
    1. Domains for 5wmf:
      1. 2952715Domain d5wmfa_: 5wmf A: [337644]
        automated match to d1b3ta_
        has additional insertions and/or extensions that are not grouped together
      2. 2952716Domain d5wmfb_: 5wmf B: [337709]
        automated match to d1b3ta_
        has additional insertions and/or extensions that are not grouped together
      3. 2952717Domain d5wmfc_: 5wmf C: [337690]
        automated match to d1b3ta_
        has additional insertions and/or extensions that are not grouped together
      4. 2952718Domain d5wmfd_: 5wmf D: [337646]
        automated match to d1b3ta_
        has additional insertions and/or extensions that are not grouped together
      5. 2952719Domain d5wmfe_: 5wmf E: [337648]
        automated match to d1b3ta_
        has additional insertions and/or extensions that are not grouped together
      6. 2952720Domain d5wmff_: 5wmf F: [337750]
        automated match to d1b3ta_
        has additional insertions and/or extensions that are not grouped together
    2. Domains for 6npi:
      1. 2952711Domain d6npia1: 6npi A:471-607 [366616]
        Other proteins in same PDB: d6npia2
        automated match to d1b3ta_
        protein/DNA complex; complexed with 60q, kw1

        has additional insertions and/or extensions that are not grouped together
      2. 2952712Domain d6npib_: 6npi B: [366611]
        Other proteins in same PDB: d6npia2
        automated match to d1b3ta_
        protein/DNA complex; complexed with 60q, kw1

        has additional insertions and/or extensions that are not grouped together
    3. Domains for 6npm:
      1. 2952713Domain d6npma1: 6npm A:471-607 [366607]
        Other proteins in same PDB: d6npma2
        automated match to d1b3ta_
        protein/DNA complex; complexed with kvd

        has additional insertions and/or extensions that are not grouped together
      2. 2952714Domain d6npmb_: 6npm B: [366655]
        Other proteins in same PDB: d6npma2
        automated match to d1b3ta_
        protein/DNA complex; complexed with kvd

        has additional insertions and/or extensions that are not grouped together
    4. Domain for 6npp:
      • 2952710Domain d6nppa1: 6npp A:471-607 [366600]
        Other proteins in same PDB: d6nppa2, d6nppb_
        automated match to d1b3ta_
        protein/DNA complex; complexed with kwg

        has additional insertions and/or extensions that are not grouped together
    5. Domains for 6vh6:
      1. 2952708Domain d6vh6a1: 6vh6 A:470-607 [385182]
        Other proteins in same PDB: d6vh6a2
        automated match to d1vhia_
        protein/DNA complex; complexed with qx4

        has additional insertions and/or extensions that are not grouped together
      2. 2952709Domain d6vh6b_: 6vh6 B: [385204]
        Other proteins in same PDB: d6vh6a2
        automated match to d1vhia_
        protein/DNA complex; complexed with qx4

        has additional insertions and/or extensions that are not grouped together
  2. 2952721Epstein-Barr virus [TaxId:10376] [54965] (2 PDB entries)
    1. Domains for 1b3t:
      1. 2952722Domain d1b3ta_: 1b3t A: [39228]
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
      2. 2952723Domain d1b3tb_: 1b3t B: [39229]
        protein/DNA complex
        has additional insertions and/or extensions that are not grouped together
    2. Domains for 1vhi:
      1. 2952724Domain d1vhia_: 1vhi A: [39230]
        has additional insertions and/or extensions that are not grouped together
      2. 2952725Domain d1vhib_: 1vhi B: [39231]
        has additional insertions and/or extensions that are not grouped together

More info for Protein Epstein barr virus nuclear antigen-1 (ebna1) from d.58.8.1: Viral DNA-binding domain

Timeline for Protein Epstein barr virus nuclear antigen-1 (ebna1) from d.58.8.1: Viral DNA-binding domain: