Lineage for Protein: Papillomavirus-1 E2 protein

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2175215Superfamily d.58.8: Viral DNA-binding domain [54957] (1 family) (S)
  5. 2175216Family d.58.8.1: Viral DNA-binding domain [54958] (3 protein domains)
  6. 2175223Protein Papillomavirus-1 E2 protein [54959] (5 species)
    forms dimers with subunit beta-sheets making (8,12) barrel

Species:

  1. 2175224Bovine papillomavirus type 1 [TaxId:10559] [54960] (3 PDB entries)
    1. Domains for 1dbd:
      1. 2175229Domain d1dbda_: 1dbd A: [39218]
      2. 2175230Domain d1dbdb_: 1dbd B: [39219]
    2. Domains for 1jjh:
      1. 2175226Domain d1jjha1: 1jjh A:326-410 [63119]
        Other proteins in same PDB: d1jjha2, d1jjhb2
      2. 2175227Domain d1jjhb1: 1jjh B:326-410 [63120]
        Other proteins in same PDB: d1jjha2, d1jjhb2
      3. 2175228Domain d1jjhc_: 1jjh C: [63121]
        Other proteins in same PDB: d1jjha2, d1jjhb2
    3. Domain for 2bop:
  2. 2175231Human papillomavirus type 16 [TaxId:333760] [54962] (5 PDB entries)
    Uniprot P03120 286-365
    1. Domain for 1by9:
    2. Domains for 1r8p:
      1. 2175237Domain d1r8pa_: 1r8p A: [111720]
      2. 2175238Domain d1r8pb_: 1r8p B: [111721]
    3. Domains for 1zzf:
      1. 2175235Domain d1zzfa_: 1zzf A: [125902]
        automated match to d1r8pa_
        protein/DNA complex
      2. 2175236Domain d1zzfb_: 1zzf B: [125903]
        automated match to d1r8pa_
        protein/DNA complex
    4. Domain for 2q79:
    5. Domain for 3mi7:
  3. 2175239Human papillomavirus type 18 [TaxId:333761] [54963] (2 PDB entries)
    1. Domains for 1f9f:
      1. 2175240Domain d1f9fa1: 1f9f A:287-365 [39224]
        Other proteins in same PDB: d1f9fa2, d1f9fb2, d1f9fc2, d1f9fd2
        complexed with so4
      2. 2175241Domain d1f9fb1: 1f9f B:287-365 [39225]
        Other proteins in same PDB: d1f9fa2, d1f9fb2, d1f9fc2, d1f9fd2
        complexed with so4
      3. 2175242Domain d1f9fc1: 1f9f C:287-365 [39226]
        Other proteins in same PDB: d1f9fa2, d1f9fb2, d1f9fc2, d1f9fd2
        complexed with so4
      4. 2175243Domain d1f9fd1: 1f9f D:287-365 [39227]
        Other proteins in same PDB: d1f9fa2, d1f9fb2, d1f9fc2, d1f9fd2
        complexed with so4
    2. Domains for 1jj4:
      1. 2175244Domain d1jj4a1: 1jj4 A:287-364 [63112]
        Other proteins in same PDB: d1jj4a2, d1jj4b2
        protein/DNA complex
      2. 2175245Domain d1jj4b1: 1jj4 B:287-364 [63113]
        Other proteins in same PDB: d1jj4a2, d1jj4b2
        protein/DNA complex
  4. 2175246Human papillomavirus type 31 [TaxId:10585] [54961] (2 PDB entries)
    1. Domain for 1a7g:
    2. Domains for 1dhm:
      1. 2175248Domain d1dhma_: 1dhm A: [39221]
      2. 2175249Domain d1dhmb_: 1dhm B: [39222]
  5. 2175250Human papillomavirus type 6a [TaxId:37122] [102990] (4 PDB entries)
    1. Domains for 1r8h:
      1. 2175251Domain d1r8ha_: 1r8h A: [97233]
        complexed with po4
      2. 2175252Domain d1r8hb_: 1r8h B: [97234]
        complexed with po4
      3. 2175253Domain d1r8hc_: 1r8h C: [97235]
        complexed with po4
      4. 2175254Domain d1r8hd_: 1r8h D: [97236]
        complexed with po4
      5. 2175255Domain d1r8he_: 1r8h E: [97237]
        complexed with po4
      6. 2175256Domain d1r8hf_: 1r8h F: [97238]
        complexed with po4
    2. Domains for 2ayb:
      1. 2175265Domain d2ayba1: 2ayb A:281-366 [127544]
        automatically matched to d1r8ha_
        protein/DNA complex
      2. 2175266Domain d2aybb1: 2ayb B:281-366 [127545]
        automatically matched to d1r8ha_
        protein/DNA complex
    3. Domains for 2aye:
      1. 2175257Domain d2ayea_: 2aye A: [127546]
        automated match to d1r8ha_
        complexed with gol, so4
      2. 2175258Domain d2ayeb_: 2aye B: [127547]
        automated match to d1r8ha_
        complexed with gol, so4
      3. 2175259Domain d2ayec_: 2aye C: [127548]
        automated match to d1r8ha_
        complexed with gol, so4
      4. 2175260Domain d2ayed_: 2aye D: [127549]
        automated match to d1r8ha_
        complexed with gol, so4
      5. 2175261Domain d2ayee_: 2aye E: [127550]
        automated match to d1r8ha_
        complexed with gol, so4
      6. 2175262Domain d2ayef_: 2aye F: [127551]
        automated match to d1r8ha_
        complexed with gol, so4
    4. Domains for 2ayg:
      1. 2175263Domain d2ayga_: 2ayg A: [127552]
        automated match to d1r8ha_
        protein/DNA complex
      2. 2175264Domain d2aygb_: 2ayg B: [127553]
        automated match to d1r8ha_
        protein/DNA complex

More info for Protein Papillomavirus-1 E2 protein from d.58.8.1: Viral DNA-binding domain

Timeline for Protein Papillomavirus-1 E2 protein from d.58.8.1: Viral DNA-binding domain: