Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.58: Ferredoxin-like [54861] (62 superfamilies) alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 |
Superfamily d.58.7: RNA-binding domain, RBD, aka RNA recognition motif (RRM) [54928] (6 families) |
Family d.58.7.1: Canonical RBD [54929] (70 proteins) Pfam PF00076 Pfam PF13893 |
Protein Splicing factor U2AF 65 KDa subunit [54936] (2 species) |
Human (Homo sapiens) [TaxId:9606] [54937] (10 PDB entries) |
Domain d1o0pa_: 1o0p A: [86535] third RNA-binding domain; complexed with an N-terminal Sf1/Mbbp peptide, chain B protein/RNA complex |
Domain d1opia_: 1opi A: [93406] third RNA-binding domain; complexed with an N-terminal Sf1/Mbbp peptide, chain B protein/RNA complex |
Domain d1u2fa_: 1u2f A: [39168] first RNA-binding domain |
Domain d2fzra1: 2fzr A:148-229 [303906] Other proteins in same PDB: d2fzra2 automated match to d2hzca_ complexed with p6g, zn |
Domain d2hzca1: 2hzc A:148-229 [165337] Other proteins in same PDB: d2hzca2 automated match to d1u2fa_ complexed with p6g, zn |
Domain d2m0gb_: 2m0g B: [243060] automated match to d1o0pa_ |
Domain d2u2fa_: 2u2f A: [39167] second RNA-binding domain |
Domain d4fxwa1: 4fxw A:375-475 [194143] Other proteins in same PDB: d4fxwa2, d4fxwc2 automated match to d1o0pa_ protein/RNA complex; complexed with so4 |
Domain d4fxwc1: 4fxw C:375-475 [194142] Other proteins in same PDB: d4fxwa2, d4fxwc2 automated match to d1o0pa_ protein/RNA complex; complexed with so4 |
Domain d5w0ga1: 5w0g A:148-229 [350950] Other proteins in same PDB: d5w0ga2 automated match to d1u2fa_ protein/RNA complex; complexed with 1pg, act, zn |
Domain d5w0ha1: 5w0h A:258-336 [350948] Other proteins in same PDB: d5w0ha2 automated match to d1d8za_ protein/RNA complex |
Mouse (Mus musculus) [TaxId:10090] [256391] (2 PDB entries) |
Domain d2m52a_: 2m52 A: [243112] automated match to d3v4ma_ |
Domain d4z2xa_: 4z2x A: [271387] automated match to d2m52a_ |
Domain d4z2xb_: 4z2x B: [271388] automated match to d2m52a_ |
Timeline for Protein Splicing factor U2AF 65 KDa subunit from d.58.7.1: Canonical RBD: