Lineage for Protein: Splicesomal U1A protein

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2174486Superfamily d.58.7: RNA-binding domain, RBD [54928] (6 families) (S)
  5. 2174487Family d.58.7.1: Canonical RBD [54929] (68 protein domains)
  6. 2174793Protein Splicesomal U1A protein [54932] (2 species)
    duplication: contains two domains of this fold

Species:

  1. 2174794Fruit fly (Drosophila melanogaster) [TaxId:7227] [160313] (3 PDB entries)
    Uniprot P43332 1-104! Uniprot P43332 134-216
    1. Domain for 2aym:
    2. Domain for 2b0g:
    3. Domain for 2k3k:
  2. 2174798Human (Homo sapiens) [TaxId:9606] [54933] (50 PDB entries)
    Uniprot P09012 1-97 ! Uniprot P09012 4-98 ! Uniprot P09012 1-98
    1. Domain for 1aud:
    2. Domain for 1cx0:
    3. Domain for 1drz:
      • 2174820Domain d1drza_: 1drz A: [39159]
        domain 1, complex with a hepatitis delta virus ribozyme
        protein/RNA complex; complexed with mg, so4
    4. Domains for 1dz5:
      1. 2174869Domain d1dz5a_: 1dz5 A: [39162]
        domain 1
        protein/RNA complex
      2. 2174870Domain d1dz5b_: 1dz5 B: [39163]
        domain 1
        protein/RNA complex
    5. Domain for 1fht:
    6. Domains for 1m5k:
      1. 2174813Domain d1m5kc_: 1m5k C: [74509]
        domain 1, complex with a hairpin ribozyme
        protein/RNA complex; complexed with ca, cl
      2. 2174814Domain d1m5kf_: 1m5k F: [74510]
        domain 1, complex with a hairpin ribozyme
        protein/RNA complex; complexed with ca, cl
    7. Domains for 1m5o:
      1. 2174805Domain d1m5oc_: 1m5o C: [78654]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
      2. 2174806Domain d1m5of_: 1m5o F: [78655]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
    8. Domains for 1m5p:
      1. 2174824Domain d1m5pc_: 1m5p C: [78656]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
      2. 2174825Domain d1m5pf_: 1m5p F: [78657]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
    9. Domains for 1m5v:
      1. 2174811Domain d1m5vc_: 1m5v C: [78662]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca, mpd
      2. 2174812Domain d1m5vf_: 1m5v F: [78663]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca, mpd
    10. Domains for 1nu4:
      1. 2174802Domain d1nu4a_: 1nu4 A: [80731]
        contains a pre-organized C-terminal helix
        complexed with mg, mla
      2. 2174803Domain d1nu4b_: 1nu4 B: [80732]
        contains a pre-organized C-terminal helix
        complexed with mg, mla
    11. Domain for 1num:
    12. Domains for 1oia:
      1. 2174808Domain d1oiaa_: 1oia A: [87051]
      2. 2174809Domain d1oiab_: 1oia B: [87052]
    13. Domain for 1sj3:
    14. Domain for 1sj4:
    15. Domain for 1sjf:
    16. Domain for 1u6b:
    17. Domains for 1urn:
      1. 2174799Domain d1urna_: 1urn A: [39153]
        domain 1
        protein/RNA complex; complexed with cl, gol; mutant
      2. 2174800Domain d1urnb_: 1urn B: [39154]
        domain 1
        protein/RNA complex; complexed with cl, gol; mutant
      3. 2174801Domain d1urnc_: 1urn C: [39155]
        domain 1
        protein/RNA complex; complexed with cl, gol; mutant
    18. Domain for 1vbx:
    19. Domain for 1vby:
    20. Domain for 1vbz:
    21. Domain for 1vc0:
    22. Domain for 1vc5:
    23. Domain for 1vc6:
    24. Domain for 1zzn:
    25. Domains for 2nz4:
      1. 2174815Domain d2nz4a_: 2nz4 A: [138833]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
      2. 2174816Domain d2nz4b_: 2nz4 B: [138834]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
      3. 2174817Domain d2nz4c_: 2nz4 C: [138835]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
      4. 2174818Domain d2nz4d_: 2nz4 D: [138836]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
    26. Domain for 2oih:
    27. Domain for 2oj3:
    28. Domain for 2u1a:
    29. Domain for 3bo2:
    30. Domain for 3bo3:
    31. Domain for 3bo4:
    32. Domains for 3cul:
      1. 2174841Domain d3cula_: 3cul A: [156993]
        automated match to d1auda_
        protein/RNA complex; complexed with k, mg
      2. 2174842Domain d3culb_: 3cul B: [156994]
        automated match to d1auda_
        protein/RNA complex; complexed with k, mg
    33. Domains for 3cun:
      1. 2174852Domain d3cuna_: 3cun A: [156997]
        automated match to d1dz5a_
        protein/RNA complex; complexed with co, k, mg
      2. 2174853Domain d3cunb_: 3cun B: [156998]
        automated match to d1dz5a_
        protein/RNA complex; complexed with co, k, mg
    34. Domain for 3egz:
    35. Domains for 3g9c:
      1. 2174844Domain d3g9ca_: 3g9c A: [176436]
        automated match to d1auda_
        complexed with glp, mg
      2. 2174845Domain d3g9cb_: 3g9c B: [176437]
        automated match to d1auda_
        complexed with glp, mg
      3. 2174846Domain d3g9cc_: 3g9c C: [176438]
        automated match to d1auda_
        complexed with glp, mg
      4. 2174847Domain d3g9cd_: 3g9c D: [176439]
        automated match to d1auda_
        complexed with glp, mg
    36. Domains for 3hhn:
      1. 2174833Domain d3hhnb_: 3hhn B: [177580]
        automated match to d1auda_
        protein/RNA complex; complexed with mg
      2. 2174834Domain d3hhnd_: 3hhn D: [177581]
        automated match to d1auda_
        protein/RNA complex; complexed with mg
    37. Domain for 3irw:
    38. Domains for 3l3c:
      1. 2174857Domain d3l3ca_: 3l3c A: [179902]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
      2. 2174858Domain d3l3cb_: 3l3c B: [179903]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
      3. 2174859Domain d3l3cc_: 3l3c C: [179904]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
      4. 2174860Domain d3l3cd_: 3l3c D: [179905]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
    39. Domain for 3mum:
    40. Domain for 3mxh:
    41. Domain for 3ucu:
    42. Domain for 3ucz:
    43. Domain for 3ud4:
    44. Domain for 4pr6:
      • 2174819Domain d4pr6a1: 4pr6 A:4-96 [267208]
        Other proteins in same PDB: d4pr6a2
        domain 1, complex with a hepatitis delta virus ribozyme
        protein/RNA complex; complexed with mg
    45. Domain for 4prf:
    46. Domain for 4yb1:
    47. Domains for 5ddo:
      1. 2174864Domain d5ddoc_: 5ddo C: [280002]
        automated match to d1dz5a_
        protein/RNA complex
      2. 2174865Domain d5ddog_: 5ddo G: [280001]
        automated match to d1dz5a_
        protein/RNA complex
    48. Domains for 5ddp:
      1. 2174837Domain d5ddpc_: 5ddp C: [280005]
        automated match to d1dz5a_
        protein/RNA complex; complexed with gln, mg, na
      2. 2174838Domain d5ddpd_: 5ddp D: [280006]
        automated match to d1dz5a_
        protein/RNA complex; complexed with gln, mg, na
    49. Domains for 5ddq:
      1. 2174849Domain d5ddqc_: 5ddq C: [280007]
        automated match to d1dz5a_
        protein/RNA complex; complexed with gln, mg, mn, na
      2. 2174850Domain d5ddqd_: 5ddq D: [280003]
        automated match to d1dz5a_
        protein/RNA complex; complexed with gln, mg, mn, na
    50. Domains for 5ddr:
      1. 2174854Domain d5ddrc_: 5ddr C: [280004]
        automated match to d1dz5a_
        protein/RNA complex; complexed with cs, gln, k, mg, na
      2. 2174855Domain d5ddrd_: 5ddr D: [280008]
        automated match to d1dz5a_
        protein/RNA complex; complexed with cs, gln, k, mg, na

More info for Protein Splicesomal U1A protein from d.58.7.1: Canonical RBD

Timeline for Protein Splicesomal U1A protein from d.58.7.1: Canonical RBD: