Lineage for Protein: Nucleoside diphosphate kinase, NDK

  1. Root: SCOP 1.71
  2. 595667Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
  3. 603243Fold d.58: Ferredoxin-like [54861] (51 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 603791Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (1 family) (S)
  5. 603792Family d.58.6.1: Nucleoside diphosphate kinase, NDK [54920] (1 protein)
  6. 603793Protein Nucleoside diphosphate kinase, NDK [54921] (13 species)

Species:

  1. 603794Bacillus halodenitrificans [TaxId:1482] [89937] (1 PDB entry)
  2. 603796Cow (Bos taurus) [TaxId:9913] [54924] (2 PDB entries)
    1. Domains for 1be4:
      1. 603797Domain d1be4a_: 1be4 A: [39090]
      2. 603798Domain d1be4b_: 1be4 B: [39091]
      3. 603799Domain d1be4c_: 1be4 C: [39092]
        complexed with pcg
    2. Domains for 1bhn:
      1. 603800Domain d1bhna_: 1bhn A: [39093]
      2. 603801Domain d1bhnb_: 1bhn B: [39094]
      3. 603802Domain d1bhnc_: 1bhn C: [39095]
      4. 603803Domain d1bhnd_: 1bhn D: [39096]
      5. 603804Domain d1bhne_: 1bhn E: [39097]
      6. 603805Domain d1bhnf_: 1bhn F: [39098]
        complexed with 35g, gdp
  3. 603806Dictyostelium discoideum [TaxId:44689] [54925] (21 PDB entries)
    1. Domains for 1b4s:
      1. 603833Domain d1b4sa_: 1b4s A: [39122]
      2. 603834Domain d1b4sb_: 1b4s B: [39123]
      3. 603835Domain d1b4sc_: 1b4s C: [39124]
        complexed with adp, mg, po4; mutant
    2. Domains for 1b99:
      1. 603837Domain d1b99a_: 1b99 A: [39126]
      2. 603838Domain d1b99b_: 1b99 B: [39127]
      3. 603839Domain d1b99c_: 1b99 C: [39128]
      4. 603840Domain d1b99d_: 1b99 D: [39129]
      5. 603841Domain d1b99e_: 1b99 E: [39130]
      6. 603842Domain d1b99f_: 1b99 F: [39131]
        complexed with fup, pop
    3. Domains for 1bux:
      1. 603847Domain d1buxa_: 1bux A: [39132]
      2. 603848Domain d1buxb_: 1bux B: [39133]
      3. 603849Domain d1buxc_: 1bux C: [39134]
        complexed with pps
    4. Domains for 1f3f:
      1. 603809Domain d1f3fa_: 1f3f A: [39101]
      2. 603810Domain d1f3fb_: 1f3f B: [39102]
      3. 603811Domain d1f3fc_: 1f3f C: [39103]
        complexed with d4d, d4t, mg, po4; mutant
    5. Domains for 1f6t:
      1. 603817Domain d1f6ta_: 1f6t A: [39110]
      2. 603818Domain d1f6tb_: 1f6t B: [39111]
      3. 603819Domain d1f6tc_: 1f6t C: [39112]
        complexed with mg, tbd
    6. Domain for 1hhq:
    7. Domains for 1hiy:
      1. 603843Domain d1hiya_: 1hiy A: [61068]
      2. 603844Domain d1hiyb_: 1hiy B: [61069]
      3. 603845Domain d1hiyc_: 1hiy C: [61070]
        complexed with 3an
    8. Domain for 1hlw:
    9. Domains for 1kdn:
      1. 603812Domain d1kdna_: 1kdn A: [39105]
      2. 603813Domain d1kdnb_: 1kdn B: [39106]
      3. 603814Domain d1kdnc_: 1kdn C: [39107]
        complexed with adp, af3, mg
    10. Domain for 1leo:
    11. Domains for 1lwx:
      1. 603830Domain d1lwxa_: 1lwx A: [39119]
      2. 603831Domain d1lwxb_: 1lwx B: [39120]
      3. 603832Domain d1lwxc_: 1lwx C: [39121]
        complexed with azd, mg; mutant
    12. Domains for 1mn7:
      1. 603824Domain d1mn7a_: 1mn7 A: [79316]
      2. 603825Domain d1mn7b_: 1mn7 B: [79317]
        complexed with abt, mg; mutant
    13. Domains for 1mn9:
      1. 603850Domain d1mn9a_: 1mn9 A: [85025]
      2. 603851Domain d1mn9b_: 1mn9 B: [85026]
      3. 603852Domain d1mn9c_: 1mn9 C: [85027]
        complexed with mg, rtp; mutant
    14. Domain for 1ncl:
    15. Domain for 1ndc:
    16. Domain for 1ndk:
    17. Domains for 1ndp:
      1. 603822Domain d1ndpa_: 1ndp A: [39113]
      2. 603823Domain d1ndpb_: 1ndp B: [39114]
        complexed with adp, mg
    18. Domain for 1npk:
    19. Domain for 1nsp:
    20. Domain for 1pae:
    21. Domains for 2bef:
      1. 603826Domain d2befa_: 2bef A: [39115]
      2. 603827Domain d2befb_: 2bef B: [39116]
      3. 603828Domain d2befc_: 2bef C: [39117]
        complexed with adp, bef, mg
  4. 603853Drosophila melanogaster [TaxId:7227] [54926] (2 PDB entries)
    1. Domains for 1ndl:
      1. 603857Domain d1ndla_: 1ndl A: [39138]
      2. 603858Domain d1ndlb_: 1ndl B: [39139]
      3. 603859Domain d1ndlc_: 1ndl C: [39140]
    2. Domains for 1nsq:
      1. 603854Domain d1nsqa_: 1nsq A: [39135]
      2. 603855Domain d1nsqb_: 1nsq B: [39136]
      3. 603856Domain d1nsqc_: 1nsq C: [39137]
        complexed with phs
  5. 603860Human (Homo sapiens) [TaxId:9606] [54922] (2 PDB entries)
    1. Domains for 1nsk:
      1. 603867Domain d1nskl_: 1nsk L: [39083]
      2. 603868Domain d1nskn_: 1nsk N: [39086]
      3. 603869Domain d1nsko_: 1nsk O: [39087]
        CASP1
      4. 603870Domain d1nskr_: 1nsk R: [39082]
      5. 603871Domain d1nskt_: 1nsk T: [39084]
      6. 603872Domain d1nsku_: 1nsk U: [39085]
    2. Domains for 1nue:
      1. 603861Domain d1nuea_: 1nue A: [39076]
      2. 603862Domain d1nueb_: 1nue B: [39077]
      3. 603863Domain d1nuec_: 1nue C: [39078]
      4. 603864Domain d1nued_: 1nue D: [39079]
      5. 603865Domain d1nuee_: 1nue E: [39080]
      6. 603866Domain d1nuef_: 1nue F: [39081]
        complexed with gdp, mg
  6. 603873Human (Homo sapiens), NDK4 [TaxId:9606] [54923] (1 PDB entry)
  7. 603876Human (Homo sapiens), NDKA [TaxId:9606] [75437] (2 PDB entries)
    1. Domains for 1jxv:
      1. 603880Domain d1jxva_: 1jxv A: [71932]
      2. 603881Domain d1jxvb_: 1jxv B: [71933]
      3. 603882Domain d1jxvc_: 1jxv C: [71934]
      4. 603883Domain d1jxvd_: 1jxv D: [71935]
      5. 603884Domain d1jxve_: 1jxv E: [71936]
      6. 603885Domain d1jxvf_: 1jxv F: [71937]
    2. Domains for 1ucn:
      1. 603877Domain d1ucna_: 1ucn A: [99183]
      2. 603878Domain d1ucnb_: 1ucn B: [99184]
      3. 603879Domain d1ucnc_: 1ucn C: [99185]
        complexed with adp, ca, po4, trs; mutant
  8. 603886Mycobacterium tuberculosis [TaxId:1773] [75438] (1 PDB entry)
  9. 603893Myxococcus xanthus [TaxId:34] [54927] (3 PDB entries)
    1. Domains for 1nhk:
      1. 603894Domain d1nhkl_: 1nhk L: [39142]
        complexed with cmp
      2. 603895Domain d1nhkr_: 1nhk R: [39141]
    2. Domains for 1nlk:
      1. 603898Domain d1nlkl_: 1nlk L: [39146]
        complexed with adp, mg
      2. 603899Domain d1nlkr_: 1nlk R: [39145]
    3. Domains for 2nck:
      1. 603896Domain d2nckl_: 2nck L: [39144]
      2. 603897Domain d2nckr_: 2nck R: [39143]
  10. 603900Pea (Pisum sativum) [TaxId:3888] [117948] (1 PDB entry)
  11. 603907Plasmodium falciparum, isolate 3D7 [TaxId:5833] [117947] (1 PDB entry)
  12. 603914Thale cress (Arabidopsis thaliana) [TaxId:3702] [117949] (1 PDB entry)
  13. 603921Thale cress (Arabidopsis thaliana), chloroplast NDK2 [TaxId:3702] [117950] (2 PDB entries)
    1. Domains for 1s57:
      1. 603922Domain d1s57a_: 1s57 A: [112028]
      2. 603923Domain d1s57b_: 1s57 B: [112029]
      3. 603924Domain d1s57c_: 1s57 C: [112030]
      4. 603925Domain d1s57d_: 1s57 D: [112031]
      5. 603926Domain d1s57e_: 1s57 E: [112032]
      6. 603927Domain d1s57f_: 1s57 F: [112033]
        complexed with epe, so4
    2. Domains for 1s59:
      1. 603928Domain d1s59a_: 1s59 A: [112034]
      2. 603929Domain d1s59b_: 1s59 B: [112035]
      3. 603930Domain d1s59c_: 1s59 C: [112036]
      4. 603931Domain d1s59d_: 1s59 D: [112037]
      5. 603932Domain d1s59e_: 1s59 E: [112038]
      6. 603933Domain d1s59f_: 1s59 F: [112039]
        complexed with dgi, dgt

More info for Protein Nucleoside diphosphate kinase, NDK from d.58.6.1: Nucleoside diphosphate kinase, NDK

Timeline for Protein Nucleoside diphosphate kinase, NDK from d.58.6.1: Nucleoside diphosphate kinase, NDK: