SCOP 1.63: Protein: Nucleoside diphosphate kinases

Lineage for Protein: Nucleoside diphosphate kinases

Root: SCOP 1.63
Class d: Alpha and beta proteins (a+b) [53931] (224 folds)
Fold d.58: Ferredoxin-like [54861] (44 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamily d.58.6: Nucleoside diphosphate kinases [54919] (1 family)
Family d.58.6.1: Nucleoside diphosphate kinases [54920] (1 protein)
Protein Nucleoside diphosphate kinases [54921] (8 species)

Species:

Cow (Bos taurus) [TaxId:9913] [54924] (2 PDB entries)
1. Domains for 1be4:
  1. Domain d1be4a_: 1be4 A: [39090]
  2. Domain d1be4b_: 1be4 B: [39091]
  3. Domain d1be4c_: 1be4 C: [39092]
    complexed with pcg
2. Domains for 1bhn:
  1. Domain d1bhna_: 1bhn A: [39093]
  2. Domain d1bhnb_: 1bhn B: [39094]
  3. Domain d1bhnc_: 1bhn C: [39095]
  4. Domain d1bhnd_: 1bhn D: [39096]
  5. Domain d1bhne_: 1bhn E: [39097]
  6. Domain d1bhnf_: 1bhn F: [39098]
    complexed with 35g, gdp
Dictyostelium discoideum [TaxId:44689] [54925] (19 PDB entries)
1. Domains for 1b4s:
  1. Domain d1b4sa_: 1b4s A: [39122]
  2. Domain d1b4sb_: 1b4s B: [39123]
  3. Domain d1b4sc_: 1b4s C: [39124]
    complexed with adp, mg, po4; mutant
2. Domains for 1b99:
  1. Domain d1b99a_: 1b99 A: [39126]
  2. Domain d1b99b_: 1b99 B: [39127]
  3. Domain d1b99c_: 1b99 C: [39128]
  4. Domain d1b99d_: 1b99 D: [39129]
  5. Domain d1b99e_: 1b99 E: [39130]
  6. Domain d1b99f_: 1b99 F: [39131]
    complexed with fup, pop
3. Domains for 1bux:
  1. Domain d1buxa_: 1bux A: [39132]
  2. Domain d1buxb_: 1bux B: [39133]
  3. Domain d1buxc_: 1bux C: [39134]
    complexed with pps
4. Domains for 1f3f:
  1. Domain d1f3fa_: 1f3f A: [39101]
  2. Domain d1f3fb_: 1f3f B: [39102]
  3. Domain d1f3fc_: 1f3f C: [39103]
    complexed with d4d, d4t, mg, po4; mutant
5. Domains for 1f6t:
  1. Domain d1f6ta_: 1f6t A: [39110]
  2. Domain d1f6tb_: 1f6t B: [39111]
  3. Domain d1f6tc_: 1f6t C: [39112]
    complexed with mg, tbd
6. Domain for 1hhq:
  - Domain d1hhqa_: 1hhq A: [61044]
    complexed with so4; mutant
7. Domains for 1hiy:
  1. Domain d1hiya_: 1hiy A: [61068]
  2. Domain d1hiyb_: 1hiy B: [61069]
  3. Domain d1hiyc_: 1hiy C: [61070]
    complexed with 3an
8. Domain for 1hlw:
  - Domain d1hlwa_: 1hlw A: [39100]
    mutant
9. Domains for 1kdn:
  1. Domain d1kdna_: 1kdn A: [39105]
  2. Domain d1kdnb_: 1kdn B: [39106]
  3. Domain d1kdnc_: 1kdn C: [39107]
    complexed with adp, af3, mg
10. Domain for 1leo:
  - Domain d1leo__: 1leo - [39125]
    mutant
11. Domains for 1lwx:
  1. Domain d1lwxa_: 1lwx A: [39119]
  2. Domain d1lwxb_: 1lwx B: [39120]
  3. Domain d1lwxc_: 1lwx C: [39121]
    complexed with azd, mg; mutant
12. Domains for 1mn7:
  1. Domain d1mn7a_: 1mn7 A: [79316]
  2. Domain d1mn7b_: 1mn7 B: [79317]
    complexed with abt, mg; mutant
13. Domain for 1ncl:
  - Domain d1ncl__: 1ncl - [39109]
    mutant
14. Domain for 1ndc:
  - Domain d1ndc__: 1ndc - [39104]
    complexed with mg, tyd
15. Domain for 1ndk:
  - Domain d1ndk__: 1ndk - [39118]
    mutant
16. Domains for 1ndp:
  1. Domain d1ndpa_: 1ndp A: [39113]
  2. Domain d1ndpb_: 1ndp B: [39114]
    complexed with adp, mg
17. Domain for 1npk:
  - Domain d1npk__: 1npk - [39099]
18. Domain for 1nsp:
  - Domain d1nsp__: 1nsp - [39108]
    complexed with phs
19. Domains for 2bef:
  1. Domain d2befa_: 2bef A: [39115]
  2. Domain d2befb_: 2bef B: [39116]
  3. Domain d2befc_: 2bef C: [39117]
    complexed with adp, bef, mg
Drosophila melanogaster [TaxId:7227] [54926] (2 PDB entries)
1. Domains for 1ndl:
  1. Domain d1ndla_: 1ndl A: [39138]
  2. Domain d1ndlb_: 1ndl B: [39139]
  3. Domain d1ndlc_: 1ndl C: [39140]
2. Domains for 1nsq:
  1. Domain d1nsqa_: 1nsq A: [39135]
  2. Domain d1nsqb_: 1nsq B: [39136]
  3. Domain d1nsqc_: 1nsq C: [39137]
    complexed with phs
Human (Homo sapiens) [TaxId:9606] [54922] (2 PDB entries)
1. Domains for 1nsk:
  1. Domain d1nskl_: 1nsk L: [39083]
  2. Domain d1nskn_: 1nsk N: [39086]
  3. Domain d1nsko_: 1nsk O: [39087]
    CASP1
  4. Domain d1nskr_: 1nsk R: [39082]
  5. Domain d1nskt_: 1nsk T: [39084]
  6. Domain d1nsku_: 1nsk U: [39085]
2. Domains for 1nue:
  1. Domain d1nuea_: 1nue A: [39076]
  2. Domain d1nueb_: 1nue B: [39077]
  3. Domain d1nuec_: 1nue C: [39078]
  4. Domain d1nued_: 1nue D: [39079]
  5. Domain d1nuee_: 1nue E: [39080]
  6. Domain d1nuef_: 1nue F: [39081]
    complexed with gdp, mg
Human (Homo sapiens), NDK4 [TaxId:9606] [54923] (1 PDB entry)
- Domains for 1ehw:
  1. Domain d1ehwa_: 1ehw A: [39088]
  2. Domain d1ehwb_: 1ehw B: [39089]
    complexed with so4; mutant
Human (Homo sapiens), NDKA [TaxId:9606] [75437] (1 PDB entry)
- Domains for 1jxv:
  1. Domain d1jxva_: 1jxv A: [71932]
  2. Domain d1jxvb_: 1jxv B: [71933]
  3. Domain d1jxvc_: 1jxv C: [71934]
  4. Domain d1jxvd_: 1jxv D: [71935]
  5. Domain d1jxve_: 1jxv E: [71936]
  6. Domain d1jxvf_: 1jxv F: [71937]
Mycobacterium tuberculosis [TaxId:1773] [75438] (1 PDB entry)
- Domains for 1k44:
  1. Domain d1k44a_: 1k44 A: [72033]
  2. Domain d1k44b_: 1k44 B: [72034]
  3. Domain d1k44c_: 1k44 C: [72035]
  4. Domain d1k44d_: 1k44 D: [72036]
  5. Domain d1k44e_: 1k44 E: [72037]
  6. Domain d1k44f_: 1k44 F: [72038]
Myxococcus xanthus [TaxId:34] [54927] (3 PDB entries)
1. Domains for 1nhk:
  1. Domain d1nhkl_: 1nhk L: [39142]
    complexed with cmp
  2. Domain d1nhkr_: 1nhk R: [39141]
2. Domains for 1nlk:
  1. Domain d1nlkl_: 1nlk L: [39146]
    complexed with adp, mg
  2. Domain d1nlkr_: 1nlk R: [39145]
3. Domains for 2nck:
  1. Domain d2nckl_: 2nck L: [39144]
  2. Domain d2nckr_: 2nck R: [39143]

More info for Protein Nucleoside diphosphate kinases from d.58.6.1: Nucleoside diphosphate kinases

Timeline for Protein Nucleoside diphosphate kinases from d.58.6.1: Nucleoside diphosphate kinases:

Protein Nucleoside diphosphate kinases from d.58.6.1: Nucleoside diphosphate kinases first appeared (with stable ids) in SCOP 1.55
Protein Nucleoside diphosphate kinases from d.58.6.1: Nucleoside diphosphate kinases appears in SCOP 1.61
Protein Nucleoside diphosphate kinases from d.58.6.1: Nucleoside diphosphate kinases appears in SCOP 1.65
Protein Nucleoside diphosphate kinases from d.58.6.1: Nucleoside diphosphate kinases appears in the current release, SCOPe 2.08, called Protein Nucleoside diphosphate kinase, NDK from d.58.6.1: Nucleoside diphosphate kinase, NDK