Lineage for Superfamily d.58.4: Dimeric alpha+beta barrel

  1. Root: SCOP 1.69
  2. 496776Class d: Alpha and beta proteins (a+b) [53931] (279 folds)
  3. 503917Fold d.58: Ferredoxin-like [54861] (49 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 504226Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (11 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers

Families:

  1. 504227d.58.4.1: Muconalactone isomerase, MLI [54910] (1 protein)
    decamer: pentamer of dimers
  2. 504231d.58.4.2: Lrp/AsnC-like transcriptional regulator C-terminal domain [69733] (2 proteins)
    octamer: tetramer of dimers
  3. 504239d.58.4.3: Actinorhodin biosynthesis monooxygenase ActVa-Orf6 [82666] (1 protein)
  4. 504252d.58.4.4: Plant stress-induced protein [89927] (3 proteins)
  5. 504291d.58.4.5: PG130-like [102959] (3 proteins)
    subfamily of Pfam 03992
  6. 504305d.58.4.6: Hypothetical protein YjcS [102962] (1 protein)
  7. 504309d.58.4.7: YciI-like [102965] (1 protein)
    structural similarity to MLI extends to the active site cavity location
  8. 504314d.58.4.8: Polyketide synthesis cyclase (Pfam 04673) [110959] (1 protein)
  9. 504318d.58.4.9: DGPF domain (Pfam 04946) [110962] (1 protein)
    there is the putative active site cavity in the equivalent location location to the MLI and YciI active sites
  10. 504322d.58.4.10: Chlorite dismutase-like (Pfam 06778) [110965] (2 proteins)
    duplication: consists of two similar domains; forms a pentamer similar to the MLI decamer
  11. 504337d.58.4.11: Hypothetical protein PA3566 [110970] (1 protein)
    subfamily of Pfam 03992

More info for Superfamily d.58.4: Dimeric alpha+beta barrel

Timeline for Superfamily d.58.4: Dimeric alpha+beta barrel: