SCOPe 2.08: Protein: Pyruvate-ferredoxin oxidoreductase, PFOR, domain V

Lineage for Protein: Pyruvate-ferredoxin oxidoreductase, PFOR, domain V

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamily d.58.1: 4Fe-4S ferredoxins [54862] (7 families)

Family d.58.1.5: Ferredoxin domains from multidomain proteins [54884] (14 proteins)
members of this "family" may be more closely related to other ferredoxins than to each other
in the multi-domain class (e), this applies to domains with different numbers of (sub)domains than the most common domain

Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain V [54889] (1 species)

Species:

Desulfovibrio africanus [TaxId:873] [54890] (10 PDB entries)

Domains for 1b0p:
1. Domain d1b0pa5: 1b0p A:669-785 [39003]
  Other proteins in same PDB: d1b0pa1, d1b0pa2, d1b0pa3, d1b0pa4, d1b0pb1, d1b0pb2, d1b0pb3, d1b0pb4
  complexed with ca, mg, sf4, tpp
2. Domain d1b0pb5: 1b0p B:669-785 [39004]
  Other proteins in same PDB: d1b0pa1, d1b0pa2, d1b0pa3, d1b0pa4, d1b0pb1, d1b0pb2, d1b0pb3, d1b0pb4
  complexed with ca, mg, sf4, tpp
Domains for 1kek:
1. Domain d1keka5: 1kek A:669-785 [68528]
  Other proteins in same PDB: d1keka1, d1keka2, d1keka3, d1keka4, d1kekb1, d1kekb2, d1kekb3, d1kekb4
  complexed with ca, co2, htl, mg, sf4
2. Domain d1kekb5: 1kek B:669-785 [68533]
  Other proteins in same PDB: d1keka1, d1keka2, d1keka3, d1keka4, d1kekb1, d1kekb2, d1kekb3, d1kekb4
  complexed with ca, co2, htl, mg, sf4
Domains for 2c3m:
1. Domain d2c3ma5: 2c3m A:669-785 [129744]
  Other proteins in same PDB: d2c3ma1, d2c3ma2, d2c3ma3, d2c3ma4, d2c3mb1, d2c3mb2, d2c3mb3, d2c3mb4
  automated match to d1keka5
  complexed with ca, cl, mg, sf4, tpp
2. Domain d2c3mb5: 2c3m B:669-785 [129749]
  Other proteins in same PDB: d2c3ma1, d2c3ma2, d2c3ma3, d2c3ma4, d2c3mb1, d2c3mb2, d2c3mb3, d2c3mb4
  automated match to d1keka5
  complexed with ca, cl, mg, sf4, tpp

Domains for 2c3o:

Domain d2c3oa5: 2c3o A:669-785 [129754]
Other proteins in same PDB: d2c3oa1, d2c3oa2, d2c3oa3, d2c3oa4, d2c3ob1, d2c3ob2, d2c3ob3, d2c3ob4
automated match to d1keka5
complexed with ca, mg, pyr, sf4, tpp

Domain d2c3ob5: 2c3o B:669-785 [129759]
Other proteins in same PDB: d2c3oa1, d2c3oa2, d2c3oa3, d2c3oa4, d2c3ob1, d2c3ob2, d2c3ob3, d2c3ob4
automated match to d1keka5
complexed with ca, mg, pyr, sf4, tpp

Domains for 2c3p:
1. Domain d2c3pa5: 2c3p A:669-785 [129764]
  Other proteins in same PDB: d2c3pa1, d2c3pa2, d2c3pa3, d2c3pa4, d2c3pb1, d2c3pb2, d2c3pb3, d2c3pb4
  automated match to d1keka5
  complexed with 1tp, ca, mg, sf4
2. Domain d2c3pb5: 2c3p B:669-785 [129769]
  Other proteins in same PDB: d2c3pa1, d2c3pa2, d2c3pa3, d2c3pa4, d2c3pb1, d2c3pb2, d2c3pb3, d2c3pb4
  automated match to d1keka5
  complexed with 1tp, ca, mg, sf4

Domains for 2c3u:

Domain d2c3ua5: 2c3u A:669-785 [129774]
Other proteins in same PDB: d2c3ua1, d2c3ua2, d2c3ua3, d2c3ua4, d2c3ub1, d2c3ub2, d2c3ub3, d2c3ub4
automated match to d1keka5
complexed with 2tp, ca, mg, pyr, sf4

Domain d2c3ub5: 2c3u B:669-785 [129779]
Other proteins in same PDB: d2c3ua1, d2c3ua2, d2c3ua3, d2c3ua4, d2c3ub1, d2c3ub2, d2c3ub3, d2c3ub4
automated match to d1keka5
complexed with 2tp, ca, mg, pyr, sf4

Domains for 2c3y:

Domain d2c3ya5: 2c3y A:669-785 [129784]
Other proteins in same PDB: d2c3ya1, d2c3ya2, d2c3ya3, d2c3ya4, d2c3yb1, d2c3yb2, d2c3yb3, d2c3yb4
automated match to d1keka5
complexed with ca, co2, htl, mg, sf4

Domain d2c3yb5: 2c3y B:669-785 [129789]
Other proteins in same PDB: d2c3ya1, d2c3ya2, d2c3ya3, d2c3ya4, d2c3yb1, d2c3yb2, d2c3yb3, d2c3yb4
automated match to d1keka5
complexed with ca, co2, htl, mg, sf4

Domains for 2c42:

Domain d2c42a5: 2c42 A:669-785 [129794]
Other proteins in same PDB: d2c42a1, d2c42a2, d2c42a3, d2c42a4, d2c42b1, d2c42b2, d2c42b3, d2c42b4
automated match to d1keka5
complexed with ca, mg, pyr, sf4, tpp

Domain d2c42b5: 2c42 B:669-785 [129799]
Other proteins in same PDB: d2c42a1, d2c42a2, d2c42a3, d2c42a4, d2c42b1, d2c42b2, d2c42b3, d2c42b4
automated match to d1keka5
complexed with ca, mg, pyr, sf4, tpp

Domains for 2pda:
1. Domain d2pdaa5: 2pda A:669-785 [39005]
  Other proteins in same PDB: d2pdaa1, d2pdaa2, d2pdaa3, d2pdaa4, d2pdab1, d2pdab2, d2pdab3, d2pdab4
  complexed with ca, mg, pyr, sf4, tpp
2. Domain d2pdab5: 2pda B:669-785 [39006]
  Other proteins in same PDB: d2pdaa1, d2pdaa2, d2pdaa3, d2pdaa4, d2pdab1, d2pdab2, d2pdab3, d2pdab4
  complexed with ca, mg, pyr, sf4, tpp

Domains for 2uza:

Domain d2uzaa5: 2uza A:669-785 [152329]
Other proteins in same PDB: d2uzaa1, d2uzaa2, d2uzaa3, d2uzaa4, d2uzab1, d2uzab2, d2uzab3, d2uzab4
automated match to d1keka5
complexed with ca, co2, htl, mg, sf4

Domain d2uzab5: 2uza B:669-785 [152334]
Other proteins in same PDB: d2uzaa1, d2uzaa2, d2uzaa3, d2uzaa4, d2uzab1, d2uzab2, d2uzab3, d2uzab4
automated match to d1keka5
complexed with ca, co2, htl, mg, sf4

More info for Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain V from d.58.1.5: Ferredoxin domains from multidomain proteins

Timeline for Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain V from d.58.1.5: Ferredoxin domains from multidomain proteins:

Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain V from d.58.1.5: Ferredoxin domains from multidomain proteins first appeared (with stable ids) in SCOP 1.55
Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain V from d.58.1.5: Ferredoxin domains from multidomain proteins appears in SCOPe 2.07