Lineage for Family d.51.1.1: Eukaryotic type KH-domain (KH-domain type I)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1202875Fold d.51: Eukaryotic type KH-domain (KH-domain type I) [54790] (1 superfamily)
    beta-alpha(2)-beta(2)-alpha; 2 layers: alpha/beta
  4. 1202876Superfamily d.51.1: Eukaryotic type KH-domain (KH-domain type I) [54791] (1 family) (S)
    Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
  5. 1202877Family d.51.1.1: Eukaryotic type KH-domain (KH-domain type I) [54792] (17 proteins)
    an RNA-binding domain

Proteins:

  1. 1202878Exosome complex RNA-binding protein 1, ECR1 [160229] (3 species)
    1. 1202879Species Aeropyrum pernix [TaxId:56636] [160231] (1 PDB entry)
      Uniprot Q9YC02 148-234
    2. 1202881Species Archaeoglobus fulgidus [TaxId:2234] [160230] (1 PDB entry)
      Uniprot O29758 136-219
    3. 1202885Species Sulfolobus solfataricus [TaxId:2287] [160232] (2 PDB entries)
      Uniprot Q9UXC4 153-221
  2. 1202888Far upstream binding element, FBP [75418] (2 species)
    1. 1202889Species Human (Homo sapiens) [TaxId:9606] [75419] (1 PDB entry)
    2. 1202892Species Mouse (Mus musculus) [TaxId:10090] [143219] (2 PDB entries)
      Uniprot Q91WJ8 175-255! Uniprot Q91WJ8 89-168
  3. 1202895Fragile X mental retardation syndrome related protein 1, FXR1 [143222] (1 species)
  4. 1202898Fragile X protein, KH1 [54799] (1 species)
  5. 1202901HnRNP K, KH3 [54801] (1 species)
  6. 1202911Hypothetical protein APE0754 [110927] (1 species)
    duplication: tandem repeat of two KH-1 domains
  7. 1202915Neuro-oncological ventral antigen 1, nova-1, KH3 [54793] (1 species)
  8. 1202918Neuro-oncological ventral antigen 2, nova-2, KH3 [54795] (1 species)
  9. 1202926Poly(RC)-binding protein 1 [143224] (1 species)
  10. 1202929Poly(RC)-binding protein 2 [143220] (1 species)
    contains three KH domains
  11. 1202944Quaking protein A (Xqua) [143226] (1 species)
  12. 1202947Ribosomal RNA-processing protein 4, RRP4 [160227] (1 species)
  13. 1202950Ribosomal RNA-processing protein 40, RRP40 [160233] (2 species)
    1. 1202951Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [160234] (1 PDB entry)
      Uniprot Q08285 152-236
    2. 1202953Species Human (Homo sapiens) [TaxId:9606] [160235] (1 PDB entry)
      Uniprot Q9NQT5 196-275
  14. 1202955RNA splicing factor 1 [69699] (1 species)
  15. 1202958Tudor and KH domain containing protein, Tdrkh [117912] (1 species)
  16. 1202961Vigilin [54797] (1 species)
  17. 1202971automated matches [195910] (1 species)
    not a true protein

More info for Family d.51.1.1: Eukaryotic type KH-domain (KH-domain type I)

Timeline for Family d.51.1.1: Eukaryotic type KH-domain (KH-domain type I):