Lineage for Species: Burkholderia cepacia (formerly Pseudomonas cepacia)

  1. Root: SCOP 1.65
  2. 323018Class d: Alpha and beta proteins (a+b) [53931] (234 folds)
  3. 327552Fold d.32: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54592] (1 superfamily)
    beta-alpha-beta(3); 2 layers: alpha/beta
  4. 327553Superfamily d.32.1: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54593] (5 families) (S)
  5. 327617Family d.32.1.3: Extradiol dioxygenases [54602] (4 proteins)
    duplication: consists of 2 similar domains with 2 repeats in each
    Similar to the Methylmalonyl-CoA epimerase dimer
  6. 327618Protein 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) [54603] (2 species)
  7. 327619Species Burkholderia cepacia (formerly Pseudomonas cepacia) [54605] (6 PDB entries)

PDB entries in Species: Burkholderia cepacia (formerly Pseudomonas cepacia):

  1. Domain(s) for 1han:
    1. 327624Domain d1han_1: 1han 2-132 [38506]
    2. 327625Domain d1han_2: 1han 133-289 [38507]
      CASP1
      complexed with fe, tbu; mutant
  2. Domain(s) for 1kmy:
    1. 327626Domain d1kmya1: 1kmy A:2-132 [68697]
    2. 327627Domain d1kmya2: 1kmy A:133-289 [68698]
      complexed with bpy, fe2, tbu
  3. Domain(s) for 1knd:
    1. 327628Domain d1knda1: 1knd A:2-132 [72772]
    2. 327629Domain d1knda2: 1knd A:133-289 [72773]
      complexed with caq, fe2, tbu
  4. Domain(s) for 1knf:
    1. 327630Domain d1knfa1: 1knf A:2-132 [72775]
    2. 327631Domain d1knfa2: 1knf A:133-289 [72776]
      complexed with fe2, mbd, tbu
  5. Domain(s) for 1lgt:
    1. 327620Domain d1lgta1: 1lgt A:2-132 [77956]
    2. 327621Domain d1lgta2: 1lgt A:133-288 [77957]
      complexed with bp3, fe2
  6. Domain(s) for 1lkd:
    1. 327622Domain d1lkda1: 1lkd A:2-132 [78059]
    2. 327623Domain d1lkda2: 1lkd A:133-288 [78060]
      complexed with bp6, fe2, p6g

More info for Species Burkholderia cepacia (formerly Pseudomonas cepacia) from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)

Timeline for Species Burkholderia cepacia (formerly Pseudomonas cepacia) from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme):

  • Species Burkholderia cepacia (formerly Pseudomonas cepacia) from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) first appeared (with stable ids) in SCOP 1.55, called Species Pseudomonas cepacia [TaxId:292] from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHDB, BPHC enzyme)
  • Species Burkholderia cepacia (formerly Pseudomonas cepacia) from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) appears in SCOP 1.63
  • Species Burkholderia cepacia (formerly Pseudomonas cepacia) from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) appears in SCOP 1.67
  • Species Burkholderia cepacia (formerly Pseudomonas cepacia) from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) appears in the current release, SCOPe 2.08, called Species Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId:292] from d.32.1.3 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)