SCOPe 2.08: Family d.31.1.1: Cdc48 domain 2-like

Lineage for Family d.31.1.1: Cdc48 domain 2-like

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.31: Cdc48 domain 2-like [54584] (1 superfamily)
   beta-alpha-beta(3); 2 layers: alpha/beta

4. Superfamily d.31.1: Cdc48 domain 2-like [54585] (2 families)

5. Family d.31.1.1: Cdc48 domain 2-like [54586] (4 proteins)

Proteins:

1. C-terminal domain of NSF-N, NSF-Nc [54587] (2 species)
   NSF-N, the N-terminal 'functional' domain of the N-ethylmaleimide sensitive fusion protein, consists of two structural domains

   1. Species Baker's yeast (Saccharomyces cerevisiae), sec18p [TaxId:4932] [54589] (1 PDB entry)

   2. Species Chinese hamster (Cricetulus griseus) [TaxId:10029] [54588] (2 PDB entries)

2. C-terminal domain of VAT-N, VAT-Nc [54590] (1 species)
   VAT-N is the N-terminal 'functional' domain of the VCP-like ATPase

   • Species Thermoplasma acidophilum [TaxId:2303] [54591] (2 PDB entries)

3. Membrane fusion atpase p97 domain 2, P97-Nc [64254] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [233318] (13 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [64255] (5 PDB entries)

4. Peroxisome biogenesis factor 1 (PEX-1), domain 2 [110874] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [110875] (1 PDB entry)
     Uniprot Q5BL07 13-179

More info for Family d.31.1.1: Cdc48 domain 2-like

Timeline for Family d.31.1.1: Cdc48 domain 2-like:

• Family d.31.1.1: Cdc48 domain 2-like first appeared (with stable ids) in SCOP 1.55
  
• Family d.31.1.1: Cdc48 domain 2-like appears in SCOPe 2.07