SCOPe 2.06: Protein: Uracil-DNA glycosylase inhibitor protein

Lineage for Protein: Uracil-DNA glycosylase inhibitor protein

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.17: Cystatin-like [54402] (7 superfamilies)
Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
Superfamily d.17.5: Uracil-DNA glycosylase inhibitor protein [54441] (1 family)
has an additional strand at the C-terminus and a helix inserted after the first strand
Family d.17.5.1: Uracil-DNA glycosylase inhibitor protein [54442] (1 protein)
Protein Uracil-DNA glycosylase inhibitor protein [54443] (2 species)

Species:

Bacteriophage pbs1 [TaxId:10683] [54444] (1 PDB entry)
- Domain for 1udi:
  - Domain d1udii_: 1udi I: [38124]
    Other proteins in same PDB: d1udie_
    protein/DNA complex

Bacteriophage pbs2 [TaxId:10684] [54445] (11 PDB entries)

Domains for 1eui:
1. Domain d1euic_: 1eui C: [38140]
  Other proteins in same PDB: d1euia_, d1euib_
  protein/DNA complex
2. Domain d1euid_: 1eui D: [38141]
  Other proteins in same PDB: d1euia_, d1euib_
  protein/DNA complex
Domains for 1lqg:
1. Domain d1lqgc_: 1lqg C: [78133]
  Other proteins in same PDB: d1lqga_, d1lqgb_
  protein/DNA complex
2. Domain d1lqgd_: 1lqg D: [78134]
  Other proteins in same PDB: d1lqga_, d1lqgb_
  protein/DNA complex
Domains for 1lqm:
1. Domain d1lqmb_: 1lqm B: [78142]
  Other proteins in same PDB: d1lqma_, d1lqmc_, d1lqme_, d1lqmg_
  protein/DNA complex
2. Domain d1lqmd_: 1lqm D: [78144]
  Other proteins in same PDB: d1lqma_, d1lqmc_, d1lqme_, d1lqmg_
  protein/DNA complex
3. Domain d1lqmf_: 1lqm F: [78146]
  Other proteins in same PDB: d1lqma_, d1lqmc_, d1lqme_, d1lqmg_
  protein/DNA complex
4. Domain d1lqmh_: 1lqm H: [78148]
  Other proteins in same PDB: d1lqma_, d1lqmc_, d1lqme_, d1lqmg_
  protein/DNA complex
Domain for 1ugh:
- Domain d1ughi_: 1ugh I: [38133]
  Other proteins in same PDB: d1ughe1, d1ughe2
  protein/DNA complex
Domains for 1ugi:
1. Domain d1ugia_: 1ugi A: [38125]
  complexed with imd, so4
2. Domain d1ugib_: 1ugi B: [38126]
  complexed with imd, so4
3. Domain d1ugic_: 1ugi C: [38127]
  complexed with imd, so4
4. Domain d1ugid_: 1ugi D: [38128]
  complexed with imd, so4
5. Domain d1ugie_: 1ugi E: [38129]
  complexed with imd, so4
6. Domain d1ugif_: 1ugi F: [38130]
  complexed with imd, so4
7. Domain d1ugig_: 1ugi G: [38131]
  complexed with imd, so4
8. Domain d1ugih_: 1ugi H: [38132]
  complexed with imd, so4
Domains for 1uug:
1. Domain d1uugb_: 1uug B: [38136]
  Other proteins in same PDB: d1uuga_, d1uugc_
  protein/DNA complex
2. Domain d1uugd_: 1uug D: [38137]
  Other proteins in same PDB: d1uuga_, d1uugc_
  protein/DNA complex
Domains for 2j8x:
1. Domain d2j8xb_: 2j8x B: [138143]
  Other proteins in same PDB: d2j8xa1, d2j8xc_
  automated match to d1lqmh_
  protein/DNA complex; complexed with ure
2. Domain d2j8xd_: 2j8x D: [138144]
  Other proteins in same PDB: d2j8xa1, d2j8xc_
  automated match to d1lqmh_
  protein/DNA complex; complexed with ure
Domains for 2ugi:
1. Domain d2ugia_: 2ugi A: [38134]
  protein/DNA complex; complexed with imd
2. Domain d2ugib_: 2ugi B: [38135]
  protein/DNA complex; complexed with imd
Domains for 2uug:
1. Domain d2uugc_: 2uug C: [38138]
  Other proteins in same PDB: d2uuga_, d2uugb_
  protein/DNA complex; mutant
2. Domain d2uugd_: 2uug D: [38139]
  Other proteins in same PDB: d2uuga_, d2uugb_
  protein/DNA complex; mutant
Domains for 2zhx:
1. Domain d2zhxb_: 2zhx B: [154474]
  Other proteins in same PDB: d2zhxa_, d2zhxc_, d2zhxe_, d2zhxg_, d2zhxi_, d2zhxk_, d2zhxm_
  automated match to d1lqmh_
  protein/DNA complex
2. Domain d2zhxd_: 2zhx D: [154475]
  Other proteins in same PDB: d2zhxa_, d2zhxc_, d2zhxe_, d2zhxg_, d2zhxi_, d2zhxk_, d2zhxm_
  automated match to d1lqmh_
  protein/DNA complex
3. Domain d2zhxf_: 2zhx F: [154476]
  Other proteins in same PDB: d2zhxa_, d2zhxc_, d2zhxe_, d2zhxg_, d2zhxi_, d2zhxk_, d2zhxm_
  automated match to d1lqmh_
  protein/DNA complex
4. Domain d2zhxh_: 2zhx H: [154477]
  Other proteins in same PDB: d2zhxa_, d2zhxc_, d2zhxe_, d2zhxg_, d2zhxi_, d2zhxk_, d2zhxm_
  automated match to d1lqmh_
  protein/DNA complex
5. Domain d2zhxj_: 2zhx J: [154478]
  Other proteins in same PDB: d2zhxa_, d2zhxc_, d2zhxe_, d2zhxg_, d2zhxi_, d2zhxk_, d2zhxm_
  automated match to d1lqmh_
  protein/DNA complex
6. Domain d2zhxl_: 2zhx L: [154479]
  Other proteins in same PDB: d2zhxa_, d2zhxc_, d2zhxe_, d2zhxg_, d2zhxi_, d2zhxk_, d2zhxm_
  automated match to d1lqmh_
  protein/DNA complex
7. Domain d2zhxn_: 2zhx N: [154480]
  Other proteins in same PDB: d2zhxa_, d2zhxc_, d2zhxe_, d2zhxg_, d2zhxi_, d2zhxk_, d2zhxm_
  automated match to d1lqmh_
  protein/DNA complex

Domains for 4lyl:

Domain d4lylb_: 4lyl B: [258924]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

Domain d4lyld_: 4lyl D: [258927]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

Domain d4lylf_: 4lyl F: [258923]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

Domain d4lylh_: 4lyl H: [258928]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

Domain d4lylj_: 4lyl J: [258929]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

Domain d4lyll_: 4lyl L: [258936]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

Domain d4lyln_: 4lyl N: [258934]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

Domain d4lylp_: 4lyl P: [258938]
Other proteins in same PDB: d4lyla1, d4lyla2, d4lylc1, d4lylc2, d4lyle1, d4lyle2, d4lylg1, d4lylg2, d4lyli1, d4lyli2, d4lylk1, d4lylk2, d4lylm1, d4lylm2, d4lylo1, d4lylo2
automated match to d1ugia_
protein/DNA complex

More info for Protein Uracil-DNA glycosylase inhibitor protein from d.17.5.1: Uracil-DNA glycosylase inhibitor protein

Timeline for Protein Uracil-DNA glycosylase inhibitor protein from d.17.5.1: Uracil-DNA glycosylase inhibitor protein:

Protein Uracil-DNA glycosylase inhibitor protein from d.17.5.1: Uracil-DNA glycosylase inhibitor protein first appeared (with stable ids) in SCOP 1.55
Protein Uracil-DNA glycosylase inhibitor protein from d.17.5.1: Uracil-DNA glycosylase inhibitor protein appears in SCOPe 2.05
Protein Uracil-DNA glycosylase inhibitor protein from d.17.5.1: Uracil-DNA glycosylase inhibitor protein appears in SCOPe 2.07
Protein Uracil-DNA glycosylase inhibitor protein from d.17.5.1: Uracil-DNA glycosylase inhibitor protein appears in the current release, SCOPe 2.08