Lineage for Superfamily d.17.4: NTF2-like

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 855301Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 855675Superfamily d.17.4: NTF2-like [54427] (30 families) (S)
    has a beta-alpha(2)-beta insertion after the main helix

Families:

  1. 855676d.17.4.1: Scytalone dehydratase [54428] (1 protein)
  2. 855699d.17.4.2: NTF2-like [54431] (6 proteins)
  3. 855766d.17.4.3: Ketosteroid isomerase-like [54434] (2 proteins)
  4. 855839d.17.4.4: Ring hydroxylating beta subunit [54438] (6 proteins)
    Pfam PF00866
  5. 855889d.17.4.5: Penicillin binding protein 2a (PBP2A), N-terminal domain [82595] (1 protein)
    some sequence similarity to KSI
  6. 855902d.17.4.6: Orange carotenoid protein, C-terminal domain [82598] (1 protein)
  7. 855907d.17.4.7: Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A [89851] (1 protein)
  8. 855939d.17.4.8: Limonene-1,2-epoxide hydrolase-like [89854] (2 proteins)
  9. 855951d.17.4.9: SnoaL-like polyketide cyclase [102810] (5 proteins)
  10. 855976d.17.4.10: PhzA/PhzB-like [102813] (4 proteins)
  11. 855994d.17.4.11: Hypothetical protein egc068 from a soil-derived mobile gene cassette [110826] (1 protein)
  12. 855998d.17.4.12: PA1314-like [110829] (1 protein)
    COG4460
  13. 856002d.17.4.13: TIM44-like [143001] (1 protein)
    contains extra N-terminal helices but lacks the beta-hairpin in the superfamily-specific insertion
  14. 856008d.17.4.14: Sbal0622-like [159985] (1 protein)
    PfamB PB002762
  15. 856023d.17.4.15: CHU142-like [159988] (1 protein)
    single domain covered by PfamB PB000743 in the N-terminal part and PfamB PB000860 in the C-terminal part
  16. 856030d.17.4.16: SO0125-like [159991] (2 proteins)
    PfamB PB003666
  17. 856042d.17.4.17: SAV4671-like [159996] (1 protein)
    PfamB PB000442; uncertain annotation of some members as 3-dehydroquinate dehydratase
  18. 856048d.17.4.18: BxeB1374-like [159999] (2 proteins)
    similar dimer to KSI
  19. 856059d.17.4.19: Atu0744-like [160004] (1 protein)
    PfamB PB003773
  20. 856064d.17.4.20: Rpa4348-like [160007] (2 proteins)
    PfamB PB000085
  21. 856071d.17.4.21: Ava4193-like [160012] (1 protein)
    PfamB PB183524
  22. 856078d.17.4.22: YybH-like [160015] (1 protein)
    PfamB PB052627
  23. 856085d.17.4.23: PFL3262-like [160018] (1 protein)
    Pfam PF07080; DUF1348
  24. 856092d.17.4.24: Exig0174-like [160021] (1 protein)
    PfamB PB092483
  25. 856097d.17.4.25: Rv3472-like [160024] (2 proteins)
    similar trimer to Scytalone dehydratase
  26. 856108d.17.4.26: VirB8-like [160029] (1 protein)
    Pfam PF04335
  27. 856119d.17.4.27: ECA1476-like [160033] (1 protein)
    single domain covered by PfamB PB006272 in the N-terminal part and PfamB PB005262 in the C-terminal part
  28. 856126d.17.4.28: BaiE/LinA-like [160036] (5 proteins)
    PfamB PB000019; includes sequences of characterized enzymes BaiE and LinA
  29. 856148d.17.4.29: Atu0742-like [160047] (1 protein)
    PfamB PB017405
  30. 856152d.17.4.30: SEC-C associated NTF2-like domain [160050] (1 protein)
    there is a C-terminal SEC-C motif, also there can be an additional SEC-C like motif at the N-terminus (there is only C-terminal motif in the new entry 2JQ5)

More info for Superfamily d.17.4: NTF2-like

Timeline for Superfamily d.17.4: NTF2-like: