Lineage for Protein: 2Fe-2S ferredoxin

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2177211Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2179170Superfamily d.15.4: 2Fe-2S ferredoxin-like [54292] (3 families) (S)
  5. 2179171Family d.15.4.1: 2Fe-2S ferredoxin-related [54293] (4 proteins)
  6. 2179172Protein 2Fe-2S ferredoxin [54294] (19 species)

Species:

  1. 2179173Anabaena sp., pcc 7119 and 7120 [TaxId:1167] [54295] (12 PDB entries)
    1. Domains for 1czp:
      1. 2179174Domain d1czpa_: 1czp A: [37645]
        complexed with fes
      2. 2179175Domain d1czpb_: 1czp B: [37646]
        complexed with fes
    2. Domain for 1ewy:
    3. Domain for 1frd:
    4. Domains for 1fxa:
      1. 2179189Domain d1fxaa_: 1fxa A: [37660]
        complexed with fes
      2. 2179190Domain d1fxab_: 1fxa B: [37661]
        complexed with fes
    5. Domain for 1j7a:
    6. Domain for 1j7b:
    7. Domain for 1j7c:
    8. Domains for 1qoa:
      1. 2179178Domain d1qoaa_: 1qoa A: [37649]
        complexed with fes; mutant
      2. 2179179Domain d1qoab_: 1qoa B: [37650]
        complexed with fes; mutant
    9. Domains for 1qob:
      1. 2179184Domain d1qoba_: 1qob A: [37655]
        complexed with fes, so4; mutant
      2. 2179185Domain d1qobb_: 1qob B: [37656]
        complexed with fes, so4; mutant
    10. Domains for 1qof:
      1. 2179182Domain d1qofa_: 1qof A: [37653]
        complexed with fes, so4; mutant
      2. 2179183Domain d1qofb_: 1qof B: [37654]
        complexed with fes, so4; mutant
    11. Domains for 1qog:
      1. 2179186Domain d1qoga_: 1qog A: [37657]
        complexed with fes, so4; mutant
      2. 2179187Domain d1qogb_: 1qog B: [37658]
        complexed with fes, so4; mutant
    12. Domain for 1qt9:
  2. 2179192Aphanothece sacrum [TaxId:1122] [54297] (1 PDB entry)
  3. 2179197Chlorella fusca [TaxId:3073] [54300] (1 PDB entry)
  4. 2179199Equisetum arvense [TaxId:3258] [54301] (2 PDB entries)
    Uniprot P00237 # isoform II
    1. Domains for 1frr:
      1. 2179201Domain d1frra_: 1frr A: [37674]
        complexed with fes
      2. 2179202Domain d1frrb_: 1frr B: [37675]
        complexed with fes
    2. Domain for 1wri:
  5. 2179203Haloarcula marismortui [TaxId:2238] [54302] (1 PDB entry)
  6. 2179205Halobacterium halobium [TaxId:2242] [64228] (2 PDB entries)
    1. Domain for 1e0z:
    2. Domain for 1e10:
  7. 2179208Maize (Zea mays) [TaxId:4577] [54305] (5 PDB entries)
    1. Domain for 1gaq:
    2. Domains for 3b2f:
      1. 2179209Domain d3b2fa_: 3b2f A: [191860]
        automated match to d1gaqb_
        complexed with fes
      2. 2179210Domain d3b2fb_: 3b2f B: [191861]
        automated match to d1gaqb_
        complexed with fes
    3. Domains for 3w5u:
      1. 2179212Domain d3w5ub_: 3w5u B: [197448]
        Other proteins in same PDB: d3w5ua1, d3w5ua2, d3w5uc1, d3w5uc2, d3w5ue1, d3w5ue2, d3w5ug1, d3w5ug2
        automated match to d1gaqb_
        complexed with fad, fes
      2. 2179213Domain d3w5ud_: 3w5u D: [201276]
        Other proteins in same PDB: d3w5ua1, d3w5ua2, d3w5uc1, d3w5uc2, d3w5ue1, d3w5ue2, d3w5ug1, d3w5ug2
        automated match to d3w5ub_
        complexed with fad, fes
      3. 2179214Domain d3w5uf_: 3w5u F: [201279]
        Other proteins in same PDB: d3w5ua1, d3w5ua2, d3w5uc1, d3w5uc2, d3w5ue1, d3w5ue2, d3w5ug1, d3w5ug2
        automated match to d3w5ub_
        complexed with fad, fes
      4. 2179215Domain d3w5uh_: 3w5u H: [201282]
        Other proteins in same PDB: d3w5ua1, d3w5ua2, d3w5uc1, d3w5uc2, d3w5ue1, d3w5ue2, d3w5ug1, d3w5ug2
        automated match to d3w5ub_
        complexed with fad, fes
    4. Domains for 5h8y:
      1. 2179217Domain d5h8ye_: 5h8y E: [315370]
        automated match to d1gaqb_
        complexed with cl, fes, mg, sf4, srm
      2. 2179218Domain d5h8yf_: 5h8y F: [315404]
        automated match to d1gaqb_
        complexed with cl, fes, mg, sf4, srm
    5. Domain for 5h92:
  8. 2179219Malaria parasite (Plasmodium falciparum) [TaxId:5833] [102799] (1 PDB entry)
  9. 2179222Parsley (Petroselinum crispum) [TaxId:4043] [54303] (1 PDB entry)
  10. 2179224Pseudomonas putida, putidaredoxin [TaxId:303] [54307] (19 PDB entries)
    1. Domain for 1gpx:
    2. Domains for 1oqq:
      1. 2179228Domain d1oqqa_: 1oqq A: [93422]
        complexed with fes; mutant
      2. 2179229Domain d1oqqb_: 1oqq B: [93423]
        complexed with fes; mutant
    3. Domains for 1oqr:
      1. 2179230Domain d1oqra_: 1oqr A: [93424]
        complexed with fes; mutant
      2. 2179231Domain d1oqrb_: 1oqr B: [93425]
        complexed with fes; mutant
      3. 2179232Domain d1oqrc_: 1oqr C: [93426]
        complexed with fes; mutant
    4. Domain for 1pdx:
    5. Domain for 1put:
    6. Domains for 1r7s:
      1. 2179237Domain d1r7sa_: 1r7s A: [97207]
        complexed with fes; mutant
      2. 2179238Domain d1r7sb_: 1r7s B: [97208]
        complexed with fes; mutant
      3. 2179239Domain d1r7sc_: 1r7s C: [97209]
        complexed with fes; mutant
    7. Domains for 1xln:
      1. 2179244Domain d1xlna_: 1xln A: [122112]
        automated match to d1oqqa_
        complexed with fes
      2. 2179245Domain d1xlnb_: 1xln B: [122113]
        automated match to d1oqqa_
        complexed with fes
    8. Domains for 1xlo:
      1. 2179240Domain d1xloa_: 1xlo A: [122114]
        automated match to d1oqqa_
        complexed with fes
      2. 2179241Domain d1xlob_: 1xlo B: [122115]
        automated match to d1oqqa_
        complexed with fes
    9. Domains for 1xlp:
      1. 2179246Domain d1xlpa_: 1xlp A: [122116]
        automated match to d1oqra_
        complexed with fes
      2. 2179247Domain d1xlpb_: 1xlp B: [122117]
        automated match to d1oqra_
        complexed with fes
      3. 2179248Domain d1xlpc_: 1xlp C: [122118]
        automated match to d1oqra_
        complexed with fes
    10. Domains for 1xlq:
      1. 2179225Domain d1xlqa_: 1xlq A: [122119]
        automated match to d1oqra_
        complexed with fes
      2. 2179226Domain d1xlqb_: 1xlq B: [122120]
        automated match to d1oqra_
        complexed with fes
      3. 2179227Domain d1xlqc_: 1xlq C: [122121]
        automated match to d1oqra_
        complexed with fes
    11. Domain for 1yji:
    12. Domain for 1yjj:
    13. Domain for 2m56:
    14. Domains for 3lb8:
      1. 2179253Domain d3lb8c_: 3lb8 C: [180158]
        automated match to d1oqqa_
        complexed with fad, fes
      2. 2179254Domain d3lb8d_: 3lb8 D: [180159]
        automated match to d1oqqa_
        complexed with fad, fes
    15. Domain for 3w9c:
    16. Domains for 4jws:
      1. 2179242Domain d4jwsc_: 4jws C: [202815]
        Other proteins in same PDB: d4jwsa_, d4jwsb_
        automated match to d4jwsd_
        complexed with 1n0, ca, fes, hem
      2. 2179243Domain d4jwsd_: 4jws D: [197416]
        Other proteins in same PDB: d4jwsa_, d4jwsb_
        automated match to d1yjja1
        complexed with 1n0, ca, fes, hem
    17. Domains for 4jwu:
      1. 2179250Domain d4jwuc_: 4jwu C: [202817]
        Other proteins in same PDB: d4jwua_, d4jwub_
        automated match to d4jwud_
        complexed with 1n0, ca, fes, hem
      2. 2179251Domain d4jwud_: 4jwu D: [197415]
        Other proteins in same PDB: d4jwua_, d4jwub_
        automated match to d1xlqa_
        complexed with 1n0, ca, fes, hem
    18. Domains for 4jx1:
      1. 2179233Domain d4jx1c_: 4jx1 C: [224053]
        Other proteins in same PDB: d4jx1a_, d4jx1b_, d4jx1e_, d4jx1f_
        automated match to d4jwud_
        complexed with 1n0, ca, cah, cam, fes, hem
      2. 2179234Domain d4jx1d_: 4jx1 D: [224054]
        Other proteins in same PDB: d4jx1a_, d4jx1b_, d4jx1e_, d4jx1f_
        automated match to d4jwud_
        complexed with 1n0, ca, cah, cam, fes, hem
      3. 2179235Domain d4jx1g_: 4jx1 G: [224057]
        Other proteins in same PDB: d4jx1a_, d4jx1b_, d4jx1e_, d4jx1f_
        automated match to d4jwud_
        complexed with 1n0, ca, cah, cam, fes, hem
      4. 2179236Domain d4jx1h_: 4jx1 H: [224058]
        Other proteins in same PDB: d4jx1a_, d4jx1b_, d4jx1e_, d4jx1f_
        automated match to d4jwud_
        complexed with 1n0, ca, cah, cam, fes, hem
    19. Domain for 5gxg:
  11. 2179261Pseudomonas sp., terpredoxin [TaxId:306] [54309] (1 PDB entry)
  12. 2179263Rhodobacter capsulatus, ferredoxin VI [TaxId:1061] [64230] (2 PDB entries)
    1. Domain for 1e9m:
    2. Domain for 1uwm:
  13. 2179266Spinach (Spinacia oleracea) [TaxId:3562] [54304] (1 PDB entry)
  14. 2179268Spirulina platensis [TaxId:118562] [54296] (1 PDB entry)
  15. 2179270Synechococcus elongatus [TaxId:32046] [54299] (3 PDB entries)
    1. Domain for 1roe:
    2. Domain for 2cjn:
    3. Domain for 2cjo:
  16. 2179274Synechocystis sp. PCC 6803 [TaxId:1148] [54298] (3 PDB entries)
    1. Domain for 1dox:
    2. Domain for 1doy:
    3. Domain for 1off:
  17. 2179278Synechocystis sp. [TaxId:1111708] [277072] (2 PDB entries)
    1. Domain for 2pvg:
    2. Domain for 5auk:
  18. 2179281Thermosynechococcus elongatus [TaxId:197221] [277073] (1 PDB entry)
  19. 2179283Trichomonas vaginalis [TaxId:5722] [75365] (1 PDB entry)

More info for Protein 2Fe-2S ferredoxin from d.15.4.1: 2Fe-2S ferredoxin-related

Timeline for Protein 2Fe-2S ferredoxin from d.15.4.1: 2Fe-2S ferredoxin-related: