SCOP 1.73: Protein: Nedd8

Lineage for Protein: Nedd8

Root: SCOP 1.73
Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
Fold d.15: beta-Grasp (ubiquitin-like) [54235] (13 superfamilies)
core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
Superfamily d.15.1: Ubiquitin-like [54236] (7 families)
Family d.15.1.1: Ubiquitin-related [54237] (38 proteins)
Pfam PF00240
Protein Nedd8 [54244] (1 species)

Species:

Human (Homo sapiens) [TaxId:9606] [54245] (6 PDB entries)
1. Domains for 1ndd:
  1. Domain d1ndda_: 1ndd A: [37599]
  2. Domain d1nddb_: 1ndd B: [37600]
  3. Domain d1nddc_: 1ndd C: [37601]
  4. Domain d1nddd_: 1ndd D: [37602]
    complexed with cli, so4
2. Domains for 1r4m:
  1. Domain d1r4mi_: 1r4m I: [97007]
    Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
  2. Domain d1r4mj_: 1r4m J: [97008]
    Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
  3. Domain d1r4mk_: 1r4m K: [97009]
    Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
  4. Domain d1r4ml_: 1r4m L: [97010]
    Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
    complexed with APPBP1 and UBA3
    complexed with zn; mutant
3. Domains for 1r4n:
  1. Domain d1r4ni_: 1r4n I: [97019]
    Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
  2. Domain d1r4nj_: 1r4n J: [97020]
    Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
  3. Domain d1r4nk_: 1r4n K: [97021]
    Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
  4. Domain d1r4nl_: 1r4n L: [97022]
    Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
    complexed with APPBP1 and UBA3
    complexed with atp, zn; mutant
4. Domain for 1xt9:
  - Domain d1xt9b_: 1xt9 B: [116014]
    Other proteins in same PDB: d1xt9a_
5. Domain for 2bkr:
  - Domain d2bkrb1: 2bkr B:1-76 [128711]
    Other proteins in same PDB: d2bkra1
    automatically matched to d1nddb_
6. Domains for 2nvu:
  1. Domain d2nvui1: 2nvu I:1-76 [138663]
    Other proteins in same PDB: d2nvua1, d2nvub1, d2nvub2
    automatically matched to d1nddb_
    complexed with atp, mg, zn; mutant
  2. Domain d2nvuj1: 2nvu J:1-76 [138664]
    Other proteins in same PDB: d2nvua1, d2nvub1, d2nvub2
    automatically matched to d1nddb_
    complexed with atp, mg, zn; mutant

More info for Protein Nedd8 from d.15.1.1: Ubiquitin-related

Timeline for Protein Nedd8 from d.15.1.1: Ubiquitin-related:

Protein Nedd8 from d.15.1.1: Ubiquitin-related first appeared (with stable ids) in SCOP 1.55
Protein Nedd8 from d.15.1.1: Ubiquitin-related appears in SCOP 1.71
Protein Nedd8 from d.15.1.1: Ubiquitin-related appears in SCOP 1.75
Protein Nedd8 from d.15.1.1: Ubiquitin-related appears in the current release, SCOPe 2.08