SCOPe 2.04: Family d.14.1.3: DNA gyrase/MutL, second domain

Lineage for Family d.14.1.3: DNA gyrase/MutL, second domain

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.3: DNA gyrase/MutL, second domain [54224] (6 proteins)

Proteins:

1. DNA gyrase B [54227] (2 species)

   1. Species Escherichia coli [TaxId:562] [54228] (1 PDB entry)

   2. Species Thermus thermophilus [TaxId:274] [75352] (1 PDB entry)

2. DNA mismatch repair protein MutL [54225] (1 species)

   • Species Escherichia coli [TaxId:562] [54226] (6 PDB entries)

3. DNA mismatch repair protein PMS2 [69656] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [69657] (3 PDB entries)

4. DNA topoisomerase II [102751] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [102752] (2 PDB entries)

5. Topoisomerase IV subunit B [102753] (1 species)

   • Species Escherichia coli [TaxId:562] [102754] (1 PDB entry)

6. Topoisomerase VI-B subunit [82577] (1 species)
   contains an H2TH domain inserted in front of this domain and after the N-terminal ATPase domain

   • Species Sulfolobus shibatae [TaxId:2286] [82578] (7 PDB entries)

More info for Family d.14.1.3: DNA gyrase/MutL, second domain

Timeline for Family d.14.1.3: DNA gyrase/MutL, second domain:

• Family d.14.1.3: DNA gyrase/MutL, second domain first appeared (with stable ids) in SCOP 1.55
  
• Family d.14.1.3: DNA gyrase/MutL, second domain appears in SCOPe 2.03
  
• Family d.14.1.3: DNA gyrase/MutL, second domain appears in SCOPe 2.05
  
• Family d.14.1.3: DNA gyrase/MutL, second domain appears in the current release, SCOPe 2.08