Lineage for Species: Mouse (Mus musculus), HP1 beta (MOD1, M31)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 372425Fold b.34: SH3-like barrel [50036] (15 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 373032Superfamily b.34.13: Chromo domain-like [54160] (2 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 373050Family b.34.13.2: Chromo domain [54165] (3 proteins)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. 373051Protein Heterochromatin protein 1, HP1 [54166] (3 species)
    duplication: consists of two homologous domains, N-terminal chromo domain and C-terminal chromo shadow domain
  7. 373058Species Mouse (Mus musculus), HP1 beta (MOD1, M31) [TaxId:10090] [54167] (4 PDB entries)

PDB entries in Species: Mouse (Mus musculus), HP1 beta (MOD1, M31):

  1. Domain(s) for 1ap0:
  2. Domain(s) for 1dz1:
    1. 373059Domain d1dz1a_: 1dz1 A: [37473]
    2. 373060Domain d1dz1b_: 1dz1 B: [37474]
      C-terminal shadow chromo domain
  3. Domain(s) for 1guw:
    • 373061Domain d1guwa_: 1guw A: [70584]
      Chromo domain complexed with the lysine 9-methyl histone H3 N-terminal peptide
      complexed with mly
  4. Domain(s) for 1s4z:
    1. 373063Domain d1s4za_: 1s4z A: [98515]
    2. 373064Domain d1s4zb_: 1s4z B: [98516]
      Chromo shadow domain complexed with pxvxl motif peptide of caf-1, chain C

More info for Species Mouse (Mus musculus), HP1 beta (MOD1, M31) [TaxId:10090] from b.34.13.2 Heterochromatin protein 1, HP1

Timeline for Species Mouse (Mus musculus), HP1 beta (MOD1, M31) [TaxId:10090] from b.34.13.2 Heterochromatin protein 1, HP1: