SCOPe 2.08: Protein: DNA-binding protein

Lineage for Protein: DNA-binding protein

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.34: SH3-like barrel [50036] (21 superfamilies)
barrel, partly opened; n*=4, S*=8; meander
the last strand is interrupted by a turn of 3-10 helix
Superfamily b.34.13: Chromo domain-like [54160] (4 families)
SH3-like barrel is capped by a C-terminal helix
Family b.34.13.1: Histone-like proteins from archaea [54161] (2 proteins)
Protein DNA-binding protein [54162] (2 species)

Species:

Sulfolobus acidocaldarius, Sac7d [TaxId:2285] [54164] (8 PDB entries)
Uniprot P13123
1. Domain for 1azp:
  - Domain d1azpa_: 1azp A: [37467]
    protein/DNA complex
2. Domain for 1azq:
  - Domain d1azqa_: 1azq A: [37469]
    protein/DNA complex
3. Domain for 1bnz:
  - Domain d1bnza_: 1bnz A: [37468]
    protein/DNA complex
4. Domain for 1ca5:
  - Domain d1ca5a_: 1ca5 A: [37471]
    protein/DNA complex
5. Domain for 1ca6:
  - Domain d1ca6a_: 1ca6 A: [37470]
    protein/DNA complex
6. Domain for 1sap:
  - Domain d1sapa_: 1sap A: [37472]
7. Domain for 1wd0:
  - Domain d1wd0a_: 1wd0 A: [109230]
    protein/DNA complex
8. Domain for 1wd1:
  - Domain d1wd1a_: 1wd1 A: [109231]
    protein/DNA complex
Sulfolobus solfataricus, Sso7d [TaxId:2287] [54163] (8 PDB entries)
Uniprot P61991
1. Domain for 1b4o:
  - Domain d1b4oa_: 1b4o A: [37464]
    mutant
2. Domains for 1bbx:
  1. Domain d1bbxc_: 1bbx C: [37465]
    protein/DNA complex
  2. Domain d1bbxd_: 1bbx D: [37466]
    protein/DNA complex
3. Domain for 1bf4:
  - Domain d1bf4a_: 1bf4 A: [37461]
    protein/DNA complex
4. Domain for 1c8c:
  - Domain d1c8ca_: 1c8c A: [59084]
    protein/DNA complex
5. Domain for 1jic:
  - Domain d1jica_: 1jic A: [37462]
6. Domain for 1r83:
  - Domain d1r83a_: 1r83 A: [302985]
    automated match to d2cvra_
    mutant
7. Domain for 1sso:
  - Domain d1ssoa_: 1sso A: [37463]
8. Domain for 2cvr:
  - Domain d2cvra_: 2cvr A: [130889]
    automated match to d2cvra1
    mutant

More info for Protein DNA-binding protein from b.34.13.1: Histone-like proteins from archaea

Timeline for Protein DNA-binding protein from b.34.13.1: Histone-like proteins from archaea:

Protein DNA-binding protein from b.34.13.1: Histone-like proteins from archaea first appeared (with stable ids) in SCOP 1.55, called Protein DNA-binding protein from d.9.2.1: "Histone-like" proteins from arhaea
Protein DNA-binding protein from b.34.13.1: Histone-like proteins from archaea was called Protein DNA-binding protein from b.34.13.1: "Histone-like" proteins from archaea in SCOPe 2.07