SCOPe 2.08: Protein: Stromal cell-derived factor-1 (SDF-1)

Lineage for Protein: Stromal cell-derived factor-1 (SDF-1)

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.9: IL8-like [54116] (2 superfamilies)
beta(3)-alpha
Superfamily d.9.1: Interleukin 8-like chemokines [54117] (2 families)
form dimers with different dimerisation modes
Family d.9.1.1: Interleukin 8-like chemokines [54118] (25 proteins)
Protein Stromal cell-derived factor-1 (SDF-1) [54150] (1 species)

Species:

Human (Homo sapiens) [TaxId:9606] [54151] (21 PDB entries)
1. Domains for 1a15:
  1. Domain d1a15a_: 1a15 A: [37451]
    complexed with so4
  2. Domain d1a15b_: 1a15 B: [37452]
    complexed with so4
2. Domains for 1qg7:
  1. Domain d1qg7a_: 1qg7 A: [37449]
    complexed with so4
  2. Domain d1qg7b_: 1qg7 B: [37450]
    complexed with so4
3. Domain for 1sdf:
  - Domain d1sdfa_: 1sdf A: [37453]
4. Domain for 1vmc:
  - Domain d1vmca_: 1vmc A: [120065]
    automated match to d2j7za_
5. Domains for 2j7z:
  1. Domain d2j7za_: 2j7z A: [138131]
    automated match to d1sdf__
  2. Domain d2j7zb_: 2j7z B: [138132]
    automated match to d1sdf__
6. Domains for 2k01:
  1. Domain d2k01a_: 2k01 A: [242327]
    automated match to d2nwga_
  2. Domain d2k01c_: 2k01 C: [242328]
    automated match to d2nwga_
7. Domains for 2k03:
  1. Domain d2k03a_: 2k03 A: [242330]
    automated match to d2nwga_
  2. Domain d2k03c_: 2k03 C: [242331]
    automated match to d2nwga_
8. Domains for 2k04:
  1. Domain d2k04a_: 2k04 A: [242332]
    automated match to d2nwga_
  2. Domain d2k04c_: 2k04 C: [242333]
    automated match to d2nwga_
9. Domains for 2k05:
  1. Domain d2k05a_: 2k05 A: [242334]
    automated match to d2nwga_
  2. Domain d2k05c_: 2k05 C: [242335]
    automated match to d2nwga_
10. Domain for 2kec:
  - Domain d2keca_: 2kec A: [242478]
    automated match to d2nwga_
11. Domain for 2ked:
  - Domain d2keda_: 2ked A: [242479]
    automated match to d2nwga_
12. Domain for 2kee:
  - Domain d2keea_: 2kee A: [242480]
    automated match to d2j7za_
13. Domain for 2kol:
  - Domain d2kola_: 2kol A: [242597]
    automated match to d2j7za_
14. Domain for 2n55:
  - Domain d2n55a1: 2n55 A:1-68 [316495]
    Other proteins in same PDB: d2n55a2
    automated match to d2nwga_
15. Domains for 2nwg:
  1. Domain d2nwga_: 2nwg A: [166382]
    automated match to d1sdfa_
  2. Domain d2nwgb_: 2nwg B: [166383]
    automated match to d1sdfa_
16. Domain for 2sdf:
  - Domain d2sdfa_: 2sdf A: [37454]
17. Domain for 3gv3:
  - Domain d3gv3a_: 3gv3 A: [177023]
    automated match to d1sdfa_
18. Domains for 3hp3:
  1. Domain d3hp3a_: 3hp3 A: [177738]
    automated match to d1sdfa_
    complexed with au
  2. Domain d3hp3b_: 3hp3 B: [177739]
    automated match to d1sdfa_
    complexed with au
  3. Domain d3hp3c_: 3hp3 C: [177740]
    automated match to d1sdfa_
    complexed with au
  4. Domain d3hp3d_: 3hp3 D: [177741]
    automated match to d1sdfa_
    complexed with au
  5. Domain d3hp3e_: 3hp3 E: [177742]
    automated match to d1sdfa_
    complexed with au
  6. Domain d3hp3f_: 3hp3 F: [177743]
    automated match to d1sdfa_
    complexed with au
  7. Domain d3hp3g_: 3hp3 G: [177744]
    automated match to d1sdfa_
    complexed with au
  8. Domain d3hp3h_: 3hp3 H: [177745]
    automated match to d1sdfa_
    complexed with au
  9. Domain d3hp3i_: 3hp3 I: [177746]
    automated match to d1sdfa_
    complexed with au
  10. Domain d3hp3j_: 3hp3 J: [177747]
    automated match to d1sdfa_
    complexed with au
19. Domains for 4lmq:
  1. Domain d4lmqd_: 4lmq D: [224706]
    Other proteins in same PDB: d4lmqe_, d4lmqh_, d4lmqi1, d4lmqi2, d4lmql1, d4lmql2
    automated match to d3hp3f_
  2. Domain d4lmqf_: 4lmq F: [224707]
    Other proteins in same PDB: d4lmqe_, d4lmqh_, d4lmqi1, d4lmqi2, d4lmql1, d4lmql2
    automated match to d3hp3f_
20. Domains for 4uai:
  1. Domain d4uaia_: 4uai A: [261412]
    automated match to d2j7za_
    complexed with 3gg, so4
  2. Domain d4uaib_: 4uai B: [260984]
    automated match to d2j7za_
    complexed with 3gg, so4
21. Domain for 6shr:
  - Domain d6shra_: 6shr A: [391513]
    automated match to d4uaib_

More info for Protein Stromal cell-derived factor-1 (SDF-1) from d.9.1.1: Interleukin 8-like chemokines

Timeline for Protein Stromal cell-derived factor-1 (SDF-1) from d.9.1.1: Interleukin 8-like chemokines:

Protein Stromal cell-derived factor-1 (SDF-1) from d.9.1.1: Interleukin 8-like chemokines first appeared (with stable ids) in SCOP 1.55
Protein Stromal cell-derived factor-1 (SDF-1) from d.9.1.1: Interleukin 8-like chemokines appears in SCOPe 2.07