SCOPe 2.07: Protein: Intron-encoded homing endonuclease I-PpoI

Lineage for Protein: Intron-encoded homing endonuclease I-PpoI

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.4: His-Me finger endonucleases [54059] (1 superfamily)
core: (alpha)-beta-omega_loop-beta-alpha; embeded in larger different structures
Superfamily d.4.1: His-Me finger endonucleases [54060] (8 families)
common motif contains conserved histidine residue and metal-binding site
Family d.4.1.3: Intron-encoded homing endonucleases [54069] (2 proteins)
Protein Intron-encoded homing endonuclease I-PpoI [54070] (1 species)

Species:

Slime mold (Physarum polycephalum) [TaxId:5791] [54071] (8 PDB entries)
1. Domains for 1a73:
  1. Domain d1a73a_: 1a73 A: [37145]
    protein/DNA complex; complexed with mg, zn
  2. Domain d1a73b_: 1a73 B: [37146]
    protein/DNA complex; complexed with mg, zn
2. Domains for 1a74:
  1. Domain d1a74a_: 1a74 A: [37155]
    protein/DNA complex; complexed with zn
  2. Domain d1a74b_: 1a74 B: [37156]
    protein/DNA complex; complexed with zn
3. Domains for 1cyq:
  1. Domain d1cyqa_: 1cyq A: [37147]
    protein/DNA complex; complexed with mg, zn
  2. Domain d1cyqb_: 1cyq B: [37148]
    protein/DNA complex; complexed with mg, zn
4. Domains for 1cz0:
  1. Domain d1cz0a_: 1cz0 A: [37151]
    protein/DNA complex; complexed with na, zn
  2. Domain d1cz0b_: 1cz0 B: [37152]
    protein/DNA complex; complexed with na, zn
5. Domains for 1evw:
  1. Domain d1evwa_: 1evw A: [37157]
    protein/DNA complex; complexed with mg, zn; mutant
  2. Domain d1evwb_: 1evw B: [37158]
    protein/DNA complex; complexed with mg, zn; mutant
  3. Domain d1evwc_: 1evw C: [37159]
    protein/DNA complex; complexed with mg, zn; mutant
  4. Domain d1evwd_: 1evw D: [37160]
    protein/DNA complex; complexed with mg, zn; mutant
6. Domains for 1evx:
  1. Domain d1evxa_: 1evx A: [37149]
    complexed with so4, zn
  2. Domain d1evxb_: 1evx B: [37150]
    complexed with so4, zn
7. Domains for 1ipp:
  1. Domain d1ippa_: 1ipp A: [37153]
    protein/DNA complex; complexed with cd, mg
  2. Domain d1ippb_: 1ipp B: [37154]
    protein/DNA complex; complexed with cd, mg
8. Domains for 2o6m:
  1. Domain d2o6ma_: 2o6m A: [166566]
    automated match to d1cyqa_
    protein/DNA complex; complexed with mg, zn; mutant
  2. Domain d2o6mb_: 2o6m B: [166567]
    automated match to d1cyqa_
    protein/DNA complex; complexed with mg, zn; mutant

More info for Protein Intron-encoded homing endonuclease I-PpoI from d.4.1.3: Intron-encoded homing endonucleases

Timeline for Protein Intron-encoded homing endonuclease I-PpoI from d.4.1.3: Intron-encoded homing endonucleases:

Protein Intron-encoded homing endonuclease I-PpoI from d.4.1.3: Intron-encoded homing endonucleases first appeared (with stable ids) in SCOP 1.55, called Protein Intron-encoded homing endonuclease I-PpoI from d.4.1.3: Cys-His box
Protein Intron-encoded homing endonuclease I-PpoI from d.4.1.3: Intron-encoded homing endonucleases appears in SCOPe 2.06
Protein Intron-encoded homing endonuclease I-PpoI from d.4.1.3: Intron-encoded homing endonucleases appears in the current release, SCOPe 2.08