Lineage for Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155058Family d.3.1.4: Transglutaminase core [54044] (3 protein domains)
  6. 2155064Protein Transglutaminase catalytic domain [54045] (4 species)
  7. 2155065Species Human (Homo sapiens), blood isozyme [TaxId:9606] [54046] (9 PDB entries)
    Coagulation factor XIII

PDB entries in Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]:

  1. Domain(s) for 1bl2:
    1. 2155074Domain d1bl2a2: 1bl2 A:191-511 [302232]
      Other proteins in same PDB: d1bl2a1, d1bl2a3, d1bl2a4, d1bl2b1, d1bl2b3, d1bl2b4
      automated match to d1f13a4
      complexed with sr
    2. 2155075Domain d1bl2b2: 1bl2 B:191-507 [302236]
      Other proteins in same PDB: d1bl2a1, d1bl2a3, d1bl2a4, d1bl2b1, d1bl2b3, d1bl2b4
      automated match to d1f13a4
      complexed with sr
  2. Domain(s) for 1evu:
    1. 2155070Domain d1evua4: 1evu A:191-508 [37113]
      Other proteins in same PDB: d1evua1, d1evua2, d1evua3, d1evub1, d1evub2, d1evub3
      complexed with ca, pgo
    2. 2155071Domain d1evub4: 1evu B:191-508 [37114]
      Other proteins in same PDB: d1evua1, d1evua2, d1evua3, d1evub1, d1evub2, d1evub3
      complexed with ca, pgo
  3. Domain(s) for 1ex0:
    1. 2155066Domain d1ex0a4: 1ex0 A:191-510 [90468]
      Other proteins in same PDB: d1ex0a1, d1ex0a2, d1ex0a3, d1ex0b1, d1ex0b2, d1ex0b3
      complexed with ca, pgo, po4; mutant
    2. 2155067Domain d1ex0b4: 1ex0 B:191-511 [90472]
      Other proteins in same PDB: d1ex0a1, d1ex0a2, d1ex0a3, d1ex0b1, d1ex0b2, d1ex0b3
      complexed with ca, pgo, po4; mutant
  4. Domain(s) for 1f13:
    1. 2155068Domain d1f13a4: 1f13 A:191-515 [37107]
      Other proteins in same PDB: d1f13a1, d1f13a2, d1f13a3, d1f13b1, d1f13b2, d1f13b3
    2. 2155069Domain d1f13b4: 1f13 B:191-515 [37108]
      Other proteins in same PDB: d1f13a1, d1f13a2, d1f13a3, d1f13b1, d1f13b2, d1f13b3
  5. Domain(s) for 1fie:
    1. 2155078Domain d1fiea4: 1fie A:191-515 [37109]
      Other proteins in same PDB: d1fiea1, d1fiea2, d1fiea3, d1fieb1, d1fieb2, d1fieb3
    2. 2155079Domain d1fieb4: 1fie B:191-515 [37110]
      Other proteins in same PDB: d1fiea1, d1fiea2, d1fiea3, d1fieb1, d1fieb2, d1fieb3
  6. Domain(s) for 1ggt:
    1. 2155082Domain d1ggta4: 1ggt A:191-515 [37111]
      Other proteins in same PDB: d1ggta1, d1ggta2, d1ggta3, d1ggtb1, d1ggtb2, d1ggtb3
    2. 2155083Domain d1ggtb4: 1ggt B:191-515 [37112]
      Other proteins in same PDB: d1ggta1, d1ggta2, d1ggta3, d1ggtb1, d1ggtb2, d1ggtb3
  7. Domain(s) for 1ggu:
    1. 2155072Domain d1ggua4: 1ggu A:191-508 [37115]
      Other proteins in same PDB: d1ggua1, d1ggua2, d1ggua3, d1ggub1, d1ggub2, d1ggub3
      complexed with ca
    2. 2155073Domain d1ggub4: 1ggu B:191-508 [37116]
      Other proteins in same PDB: d1ggua1, d1ggua2, d1ggua3, d1ggub1, d1ggub2, d1ggub3
      complexed with ca
  8. Domain(s) for 1ggy:
    1. 2155080Domain d1ggya4: 1ggy A:191-508 [37117]
      Other proteins in same PDB: d1ggya1, d1ggya2, d1ggya3, d1ggyb1, d1ggyb2, d1ggyb3
      complexed with yb
    2. 2155081Domain d1ggyb4: 1ggy B:191-508 [37118]
      Other proteins in same PDB: d1ggya1, d1ggya2, d1ggya3, d1ggyb1, d1ggyb2, d1ggyb3
      complexed with yb
  9. Domain(s) for 1qrk:
    1. 2155076Domain d1qrka4: 1qrk A:191-511 [37119]
      Other proteins in same PDB: d1qrka1, d1qrka2, d1qrka3, d1qrkb1, d1qrkb2, d1qrkb3
      complexed with sr
    2. 2155077Domain d1qrkb4: 1qrk B:191-507 [37120]
      Other proteins in same PDB: d1qrka1, d1qrka2, d1qrka3, d1qrkb1, d1qrkb2, d1qrkb3
      complexed with sr

More info for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from d.3.1.4 Transglutaminase catalytic domain

Timeline for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from d.3.1.4 Transglutaminase catalytic domain: