Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.3: Cysteine proteinases [54000] (1 superfamily) consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn |
Superfamily d.3.1: Cysteine proteinases [54001] (24 families) the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet |
Family d.3.1.4: Transglutaminase core [54044] (3 proteins) |
Protein Transglutaminase catalytic domain [54045] (4 species) |
Human (Homo sapiens), blood isozyme [TaxId:9606] [54046] (9 PDB entries) Coagulation factor XIII |
Domain d1bl2a2: 1bl2 A:191-511 [302232] Other proteins in same PDB: d1bl2a1, d1bl2a3, d1bl2a4, d1bl2b1, d1bl2b3, d1bl2b4 automated match to d1f13a4 complexed with sr |
Domain d1bl2b2: 1bl2 B:191-507 [302236] Other proteins in same PDB: d1bl2a1, d1bl2a3, d1bl2a4, d1bl2b1, d1bl2b3, d1bl2b4 automated match to d1f13a4 complexed with sr |
Domain d1ex0a4: 1ex0 A:191-510 [90468] Other proteins in same PDB: d1ex0a1, d1ex0a2, d1ex0a3, d1ex0b1, d1ex0b2, d1ex0b3 complexed with ca, pgo, po4; mutant |
Domain d1ex0b4: 1ex0 B:191-511 [90472] Other proteins in same PDB: d1ex0a1, d1ex0a2, d1ex0a3, d1ex0b1, d1ex0b2, d1ex0b3 complexed with ca, pgo, po4; mutant |
Human (Homo sapiens), TGase E3 [TaxId:9606] [75334] (9 PDB entries) |
Domain d1nufa4: 1nuf A:141-461 [86185] Other proteins in same PDB: d1nufa1, d1nufa2, d1nufa3 complexed with br, ca, cl |
Domain d1rlea6: 1rle A:141-461 [303003] Other proteins in same PDB: d1rlea5, d1rlea7, d1rlea8, d1rleb5, d1rleb7, d1rleb8 automated match to d1l9ma4 complexed with ca, gsp, mg |
Domain d1rleb6: 1rle B:141-459 [303007] Other proteins in same PDB: d1rlea5, d1rlea7, d1rlea8, d1rleb5, d1rleb7, d1rleb8 automated match to d1l9mb4 complexed with ca, gsp, mg |
Domain d1rlla2: 1rll A:141-461 [303011] Other proteins in same PDB: d1rlla1, d1rlla3, d1rlla4, d1rllb1, d1rllb3, d1rllb4 automated match to d1l9ma4 complexed with ca, gsp, mg |
Domain d1rllb2: 1rll B:141-459 [303015] Other proteins in same PDB: d1rlla1, d1rlla3, d1rlla4, d1rllb1, d1rllb3, d1rllb4 automated match to d1l9mb4 complexed with ca, gsp, mg |
Domain d1sgxa6: 1sgx A:141-461 [303067] Other proteins in same PDB: d1sgxa5, d1sgxa7, d1sgxa8, d1sgxb5, d1sgxb7, d1sgxb8 automated match to d1l9ma4 complexed with 5gp, ca, mg |
Domain d1sgxb6: 1sgx B:141-459 [303071] Other proteins in same PDB: d1sgxa5, d1sgxa7, d1sgxa8, d1sgxb5, d1sgxb7, d1sgxb8 automated match to d1l9ma4 complexed with 5gp, ca, mg |
Domain d1vjja6: 1vjj A:141-461 [303236] Other proteins in same PDB: d1vjja5, d1vjja7, d1vjja8, d1vjjb5, d1vjjb7, d1vjjb8 automated match to d1l9ma4 complexed with ca, cl, gdp, mg |
Domain d1vjjb6: 1vjj B:141-459 [303240] Other proteins in same PDB: d1vjja5, d1vjja7, d1vjja8, d1vjjb5, d1vjjb7, d1vjjb8 automated match to d1l9ma4 complexed with ca, cl, gdp, mg |
Human (Homo sapiens), tissue isozyme [TaxId:9606] [75333] (5 PDB entries) GDP-binding protein |
Domain d1kv3a4: 1kv3 A:146-468 [73030] Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3 complexed with gdp |
Domain d1kv3b4: 1kv3 B:146-468 [73034] Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3 complexed with gdp |
Domain d1kv3c4: 1kv3 C:146-468 [73038] Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3 complexed with gdp |
Domain d1kv3d4: 1kv3 D:146-468 [73042] Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3 complexed with gdp |
Domain d1kv3e4: 1kv3 E:146-468 [73046] Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3 complexed with gdp |
Domain d1kv3f4: 1kv3 F:146-468 [73050] Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3 complexed with gdp |
Domain d2q3za4: 2q3z A:146-461 [150040] Other proteins in same PDB: d2q3za1, d2q3za2, d2q3za3 automatically matched to d1kv3a4 complexed with so4 |
Domain d3ly6a2: 3ly6 A:146-468 [247545] Other proteins in same PDB: d3ly6a1, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b1, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c1, d3ly6c3, d3ly6c4, d3ly6c5 automated match to d1kv3a4 complexed with atp |
Domain d3ly6b2: 3ly6 B:146-468 [247549] Other proteins in same PDB: d3ly6a1, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b1, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c1, d3ly6c3, d3ly6c4, d3ly6c5 automated match to d1kv3a4 complexed with atp |
Domain d3ly6c2: 3ly6 C:146-468 [247553] Other proteins in same PDB: d3ly6a1, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b1, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c1, d3ly6c3, d3ly6c4, d3ly6c5 automated match to d1kv3a4 complexed with atp |
Domain d4pyga2: 4pyg A:146-468 [308020] Other proteins in same PDB: d4pyga1, d4pyga3, d4pyga4, d4pyga5, d4pygb1, d4pygb3, d4pygb4, d4pygb5, d4pyge1, d4pyge3, d4pyge4, d4pyge5 automated match to d3ly6a2 complexed with gtp |
Domain d4pygb2: 4pyg B:146-468 [308025] Other proteins in same PDB: d4pyga1, d4pyga3, d4pyga4, d4pyga5, d4pygb1, d4pygb3, d4pygb4, d4pygb5, d4pyge1, d4pyge3, d4pyge4, d4pyge5 automated match to d3ly6a2 complexed with gtp |
Domain d4pyge2: 4pyg E:146-468 [308030] Other proteins in same PDB: d4pyga1, d4pyga3, d4pyga4, d4pyga5, d4pygb1, d4pygb3, d4pygb4, d4pygb5, d4pyge1, d4pyge3, d4pyge4, d4pyge5 automated match to d3ly6a2 complexed with gtp |
Domain d6a8pa2: 6a8p A:146-463 [357953] Other proteins in same PDB: d6a8pa1, d6a8pa3, d6a8pa4, d6a8pa5, d6a8pb1, d6a8pb3, d6a8pb4, d6a8pb5, d6a8pc1, d6a8pc3, d6a8pc4 automated match to d3ly6a2 complexed with gtp; mutant |
Domain d6a8pb2: 6a8p B:146-463 [358169] Other proteins in same PDB: d6a8pa1, d6a8pa3, d6a8pa4, d6a8pa5, d6a8pb1, d6a8pb3, d6a8pb4, d6a8pb5, d6a8pc1, d6a8pc3, d6a8pc4 automated match to d3ly6a2 complexed with gtp; mutant |
Domain d6a8pc2: 6a8p C:146-463 [358182] Other proteins in same PDB: d6a8pa1, d6a8pa3, d6a8pa4, d6a8pa5, d6a8pb1, d6a8pb3, d6a8pb4, d6a8pb5, d6a8pc1, d6a8pc3, d6a8pc4 automated match to d3ly6a2 complexed with gtp; mutant |
Red sea bream (Chrysophrys major) [TaxId:143350] [64204] (1 PDB entry) |
Domain d1g0da4: 1g0d A:141-461 [60169] Other proteins in same PDB: d1g0da1, d1g0da2, d1g0da3 complexed with so4 |
Timeline for Protein Transglutaminase catalytic domain from d.3.1.4: Transglutaminase core: