Lineage for Family d.3.1.4: Transglutaminase core

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1398964Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 1398965Superfamily d.3.1: Cysteine proteinases [54001] (23 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 1399388Family d.3.1.4: Transglutaminase core [54044] (3 proteins)

Proteins:

  1. 1399389Peptide:N-glycanase 1, PNG1 [142852] (2 species)
    1. 1399390Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [142853] (1 PDB entry)
      Uniprot Q02890 8-327
    2. 1399392Species Mouse (Mus musculus) [TaxId:10090] [159840] (1 PDB entry)
      Uniprot Q9JI78 164-450
  2. 1399394Transglutaminase catalytic domain [54045] (4 species)
    1. 1399395Species Human (Homo sapiens), blood isozyme [TaxId:9606] [54046] (8 PDB entries)
      Coagulation factor XIII
    2. 1399412Species Human (Homo sapiens), TGase E3 [TaxId:9606] [75334] (5 PDB entries)
    3. 1399422Species Human (Homo sapiens), tissue isozyme [TaxId:9606] [75333] (2 PDB entries)
      GDP-binding protein
    4. 1399430Species Red sea bream (Chrysophrys major) [TaxId:143350] [64204] (1 PDB entry)
  3. 1399432automated matches [190634] (2 species)
    not a true protein
    1. 1399433Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188107] (1 PDB entry)
    2. 1399435Species Mouse (Mus musculus) [TaxId:10090] [187686] (1 PDB entry)

More info for Family d.3.1.4: Transglutaminase core

Timeline for Family d.3.1.4: Transglutaminase core: